RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 UBE2QL1A1L167 161 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 TRIM49BA6NDI0 452 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 ZNF503-AS2A6NEH8 195 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 CCDC169A6NNP5 214 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 BOLA2-SMG1P6H3BVE0 249 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 TACC1O75410 805 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 BCAS2O75934 225 aaPredicted RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 STC2O76061 302 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 SEC31AO94979 1220 aaKnown RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 HIST1H2ABP04908 130 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 HIST1H2ADP20671 130 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 PRKCHP24723 683 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 HOXD9P28356 352 aaPredicted RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 STAT6P42226 847 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 BMXP51813 675 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 CLDN2P57739 230 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 EEFSECP57772 596 aaKnown RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 MRPS35P82673 323 aaKnown RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 MAT1AQ00266 395 aaKnown RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 TFAP4Q01664 338 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 SPAG1Q07617 926 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 KLHL30Q0D2K2 578 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 ASIC2Q16515 512 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 GKAP1Q5VSY0 366 aaPredicted RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 HIST3H2AQ7L7L0 130 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 IGFN1Q86VF2 1251 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 EGFL6Q8IUX8 553 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 SHCBP1Q8NEM2 672 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 BRSK1Q8TDC3 778 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 UTP15Q8TED0 518 aaKnown RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 CNOT9Q92600 299 aaKnown RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 GAL3ST4Q96RP7 486 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 PRR25Q96S07 402 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 TKTL2Q9H0I9 626 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 IARS2Q9NSE4 1012 aaKnown RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 KCNN3Q9UGI6 736 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 FBXW11Q9UKB1 542 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 ENTPD4Q9Y227 616 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 B3GNT3Q9Y2A9 372 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 MRPS17Q9Y2R5 130 aaKnown RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 CLCA3PQ9Y6N3 262 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 CCDC144AA2RUR9 1427 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 RIMS2Q9UQ26 1411 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 TMEM2Q9UHN6 1383 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 SLIT3O75094 1523 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 SIPA1L3O60292 1781 aaPredicted RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 LTN1O94822 1766 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 DSCR3O14972 297 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 PHLPP1O60346 1717 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 JRKO75564 520 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 IPO13O94829 963 aaKnown RBP2.95□□□□□ -1.94
UBXN4-208ENST00000490163 GUCA1CO95843 209 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 TGFB1P01137 390 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 ERBB2P04626 1255 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 LCKP06239 509 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 ADH4P08319 380 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 RAP2AP10114 183 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 TMEM11P17152 192 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 ADORA2AP29274 412 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 GCH1P30793 250 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 PTPN9P43378 593 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 RPL21P46778 160 aaKnown RBP2.95□□□□□ -1.94
UBXN4-208ENST00000490163 GLRBP48167 497 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 IFNAR2P48551 515 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 CHN2P52757 468 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 POLR2LP62875 67 aaKnown RBP2.95□□□□□ -1.94
UBXN4-208ENST00000490163 CBX3Q13185 183 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 CCDC6Q16204 474 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 KIAA1755Q5JYT7 1200 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 RUFY3Q7L099 469 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 ANKRD53Q8N9V6 530 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 P2RX5Q93086 422 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 GTF3C6Q969F1 213 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 IGSF8Q969P0 613 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 PGBD1Q96JS3 809 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 ZBTB45Q96K62 511 aaPredicted RBP2.95□□□□□ -1.94
UBXN4-208ENST00000490163 RASL10BQ96S79 203 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 TCF25Q9BQ70 676 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 SPATA25Q9BR10 227 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 CACNG6Q9BXT2 260 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 MOV10L1Q9BXT6 1211 aaKnown RBP2.95□□□□□ -1.94
UBXN4-208ENST00000490163 WWTR1Q9GZV5 400 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 TMEM206Q9H813 350 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 VEZTQ9HBM0 779 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 RBM28Q9NW13 759 aaKnown RBP2.95□□□□□ -1.94
UBXN4-208ENST00000490163 RRP15Q9Y3B9 282 aaKnown RBP2.95□□□□□ -1.94
UBXN4-208ENST00000490163 PTRH2Q9Y3E5 179 aaKnown RBP2.95□□□□□ -1.94
UBXN4-208ENST00000490163 CHTOPQ9Y3Y2 248 aaKnown RBP2.95□□□□□ -1.94
UBXN4-208ENST00000490163 NWD2Q9ULI1 1742 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 ERICH4A6NGS2 130 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 LRRC72A6NJI9 287 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 AHRRA9YTQ3 701 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 BTBD19C9JJ37 291 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 CHADO15335 359 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 TRIAP1O43715 76 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 NOBOXO60393 691 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 NEMFO60524 1076 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 SELENOFO60613 162 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 UROSP10746 265 aa2.95□□□□□ -1.94
UBXN4-208ENST00000490163 TNFRSF1AP19438 455 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms