RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 ACVR1Q04771 509 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 TUBB2AQ13885 445 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 SEPT6Q14141 434 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 POU6F1Q14863 301 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 CHRNA6Q15825 494 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 PYCR3Q53H96 274 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 PCID2Q5JVF3 399 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 LRRC8BQ6P9F7 803 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 FAM151BQ6UXP7 276 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 ZNF572Q7Z3I7 529 aaPredicted RBP10.97□□□□□ -0.65
CPSF7-212ENST00000489728 SNX20Q7Z614 316 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 PRUNE1Q86TP1 453 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 HOOK3Q86VS8 718 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 PPIL6Q8IXY8 311 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 TAB3Q8N5C8 712 aaPredicted RBP10.97□□□□□ -0.65
CPSF7-212ENST00000489728 PPHLN1Q8NEY8 458 aaKnown RBP10.97□□□□□ -0.65
CPSF7-212ENST00000489728 OR6C4Q8NGE1 309 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 CPT1BQ92523 772 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 ZNF514Q96K75 400 aaPredicted RBP10.97□□□□□ -0.65
CPSF7-212ENST00000489728 CNDP2Q96KP4 475 aaKnown RBP10.97□□□□□ -0.65
CPSF7-212ENST00000489728 C16orf45Q96MC5 204 aaPredicted RBP10.97□□□□□ -0.65
CPSF7-212ENST00000489728 CAMK1GQ96NX5 476 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 TUBB2BQ9BVA1 445 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 BOCQ9BWV1 1114 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 CLPBQ9H078 707 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 DDX47Q9H0S4 455 aaKnown RBP10.97□□□□□ -0.65
CPSF7-212ENST00000489728 TCEAL2Q9H3H9 227 aaPredicted RBP10.97□□□□□ -0.65
CPSF7-212ENST00000489728 MRM3Q9HC36 420 aaKnown RBP10.97□□□□□ -0.65
CPSF7-212ENST00000489728 BFARQ9NZS9 450 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 SUFUQ9UMX1 484 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 DOLKQ9UPQ8 538 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 DNAH14Q0VDD8 3507 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 PCNX2A6NKB5 2137 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 MYLKQ15746 1914 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 TRBV5-4A0A0C4DH59 114 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 TRIM38O00635 465 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 YY2O15391 372 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 FFAR2O15552 330 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 KCNJ13O60928 360 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 ASMTLO95671 621 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 TPH1P17752 444 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 ADCY8P40145 1251 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 GRIA1P42261 906 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 GNPDA1P46926 289 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 SIM1P81133 766 aaPredicted RBP10.96□□□□□ -0.65
CPSF7-212ENST00000489728 DR1Q01658 176 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 CKAP4Q07065 602 aaKnown RBP10.96□□□□□ -0.65
CPSF7-212ENST00000489728 GTF2H3Q13889 308 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 DEFB133Q30KQ1 61 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 CERCAMQ5T4B2 595 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 TSTD2Q5T7W7 516 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 KCTD16Q68DU8 428 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 DOK6Q6PKX4 331 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 ZNF534Q76KX8 674 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 RD3Q7Z3Z2 195 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 ADGRG6Q86SQ4 1221 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 TRIM74Q86UV6 250 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 ARL10Q8N8L6 244 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 OR13C4Q8NGS5 318 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 ZNF398Q8TD17 642 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 NAT6Q93015 286 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 DNAJC1Q96KC8 554 aaKnown RBP10.96□□□□□ -0.65
CPSF7-212ENST00000489728 TTC25Q96NG3 672 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 TIMM29Q9BSF4 260 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 TMEM168Q9H0V1 697 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 MRPL40Q9NQ50 206 aaKnown RBP10.96□□□□□ -0.65
CPSF7-212ENST00000489728 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.96□□□□□ -0.65
CPSF7-212ENST00000489728 ATXN10Q9UBB4 475 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 ASIC3Q9UHC3 531 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 FKBPLQ9UIM3 349 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 MOSPD1Q9UJG1 213 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 TMPRSS11EQ9UL52 423 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 TMEM98Q9Y2Y6 226 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 TCAF1Q9Y4C2 921 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 DNMT3AQ9Y6K1 912 aaPredicted RBP10.96□□□□□ -0.65
CPSF7-212ENST00000489728 OAS3Q9Y6K5 1087 aaKnown RBP10.96□□□□□ -0.65
CPSF7-212ENST00000489728 SLC30A1Q9Y6M5 507 aa10.96□□□□□ -0.65
CPSF7-212ENST00000489728 CNOT1A5YKK6 2376 aaKnown RBP10.96□□□□□ -0.66
CPSF7-212ENST00000489728 ARID1BQ8NFD5 2236 aaPredicted RBP10.96□□□□□ -0.66
CPSF7-212ENST00000489728 IGLV3-16A0A075B6K0 115 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 MAGEB16A2A368 324 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 GIPC1O14908 333 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 KMOO15229 486 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 GRID2O43424 1007 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 BUD23O43709 281 aaKnown RBP10.95□□□□□ -0.66
CPSF7-212ENST00000489728 CDK14O94921 469 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 FUCA1P04066 466 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 FTH1P19P0C7X4 201 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 RALBP11234 206 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 SLC2A4P14672 509 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 PTGIRP43119 386 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 MAGEA3P43357 314 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 POLD2P49005 469 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 ACADVLP49748 655 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 VPS41P49754 854 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 CACNG1Q06432 222 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 TMEM115Q12893 351 aaPredicted RBP10.95□□□□□ -0.66
CPSF7-212ENST00000489728 C1orf61Q13536 156 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 NR0B2Q15466 257 aa10.95□□□□□ -0.66
CPSF7-212ENST00000489728 TRIP13Q15645 432 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms