RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 FAM151BQ6UXP7 276 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 ADGRG6Q86SQ4 1221 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 KYQ8NBH2 561 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 MAPK15Q8TD08 544 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 ACTRT1Q8TDG2 376 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 OR2AG1Q9H205 316 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 SPATS2LQ9NUQ6 558 aaKnown RBP17.17■□□□□ 0.34
MDC1-206ENST00000489540 PYCARDQ9ULZ3 195 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 SNX12Q9UMY4 172 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 TDRD6O60522 2096 aaKnown RBP17.16■□□□□ 0.34
MDC1-206ENST00000489540 USP27XA6NNY8 438 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 PGRMC1O00264 195 aaKnown RBP17.16■□□□□ 0.34
MDC1-206ENST00000489540 NOBOXO60393 691 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 CDK14O94921 469 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 ZSCAN5DPP0CG00 497 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 TPH1P17752 444 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 AK4P27144 223 aaPredicted RBP17.16■□□□□ 0.34
MDC1-206ENST00000489540 ACTR1BP42025 376 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 KCNJ1P48048 391 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 ACTR1AP61163 376 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 INSM1Q01101 510 aaPredicted RBP17.16■□□□□ 0.34
MDC1-206ENST00000489540 CDH17Q12864 832 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 PTPRCAPQ14761 206 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 LDLRAP1Q5SW96 308 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 HES3Q5TGS1 186 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 SLC30A9Q6PML9 568 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 PRUNE1Q86TP1 453 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 DNAAF3Q8N9W5 541 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 WDR48Q8TAF3 677 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 GDAP1Q8TB36 358 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 ZNF398Q8TD17 642 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 ZDHHC1Q8WTX9 485 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 MAGOHBQ96A72 148 aaKnown RBP17.16■□□□□ 0.34
MDC1-206ENST00000489540 MS4A14Q96JA4 679 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 TMPRSS11EQ9UL52 423 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 KCTD3Q9Y597 815 aa17.16■□□□□ 0.34
MDC1-206ENST00000489540 B4DGG1 531 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 CHUKO15111 745 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 LDB2O43679 373 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 UGT1A9O60656 530 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 GLB1P16278 677 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 TCP1P17987 556 aaKnown RBP17.15■□□□□ 0.34
MDC1-206ENST00000489540 UGT1A6P19224 532 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 UGT1A1P22309 533 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 UGT1A4P22310 534 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 UGT1A3P35503 534 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 UGT1A5P35504 534 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 ZNF140P52738 457 aaPredicted RBP17.15■□□□□ 0.34
MDC1-206ENST00000489540 GNG11P61952 73 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 TMEM115Q12893 351 aaPredicted RBP17.15■□□□□ 0.34
MDC1-206ENST00000489540 LAMB3Q13751 1172 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 C14orf28Q4W4Y0 310 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 ZNF648Q5T619 568 aaPredicted RBP17.15■□□□□ 0.34
MDC1-206ENST00000489540 PPP1R21Q6ZMI0 780 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 CHST15Q7LFX5 561 aaPredicted RBP17.15■□□□□ 0.34
MDC1-206ENST00000489540 GLIS1Q8NBF1 620 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 COG1Q8WTW3 980 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 TTC25Q96NG3 672 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 ZCCHC2Q9C0B9 1178 aaKnown RBP17.15■□□□□ 0.34
MDC1-206ENST00000489540 UGT1A7Q9HAW7 530 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 UGT1A10Q9HAW8 530 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 UGT1A8Q9HAW9 530 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 ARFGAP3Q9NP61 516 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 SMOXQ9NWM0 555 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 PRKAB1Q9Y478 270 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 PLEKHM1Q9Y4G2 1056 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 ST14Q9Y5Y6 855 aa17.15■□□□□ 0.34
MDC1-206ENST00000489540 GAPDHSO14556 408 aaPredicted RBP17.14■□□□□ 0.33
MDC1-206ENST00000489540 SRP72O76094 671 aaKnown RBP17.14■□□□□ 0.33
MDC1-206ENST00000489540 PRAMEF1O95521 474 aa17.14■□□□□ 0.33
MDC1-206ENST00000489540 MT-CO3P00414 261 aa17.14■□□□□ 0.33
MDC1-206ENST00000489540 APRTP07741 180 aa17.14■□□□□ 0.33
MDC1-206ENST00000489540 PNLIPP16233 465 aa17.14■□□□□ 0.33
MDC1-206ENST00000489540 GTF2H3Q13889 308 aa17.14■□□□□ 0.33
MDC1-206ENST00000489540 HLTFQ14527 1009 aaKnown RBP eCLIP17.14■□□□□ 0.33
MDC1-206ENST00000489540 PERM1Q5SV97 790 aa17.14■□□□□ 0.33
MDC1-206ENST00000489540 C17orf82Q86X59 251 aaPredicted RBP17.14■□□□□ 0.33
MDC1-206ENST00000489540 DDHD1Q8NEL9 900 aa17.14■□□□□ 0.33
MDC1-206ENST00000489540 OR52K1Q8NGK4 314 aa17.14■□□□□ 0.33
MDC1-206ENST00000489540 AP1M1Q9BXS5 423 aa17.14■□□□□ 0.33
MDC1-206ENST00000489540 ASB8Q9H765 288 aa17.14■□□□□ 0.33
MDC1-206ENST00000489540 EIF2B3Q9NR50 452 aaKnown RBP17.14■□□□□ 0.33
MDC1-206ENST00000489540 FKBPLQ9UIM3 349 aa17.14■□□□□ 0.33
MDC1-206ENST00000489540 CLCA2Q9UQC9 943 aa17.14■□□□□ 0.33
MDC1-206ENST00000489540 GOLGA6L10A0A0M3HER8 536 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 FAM149AA5PLN7 773 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 AP3B1O00203 1094 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 KMOO15229 486 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 NUDT21O43809 227 aaKnown RBP17.13■□□□□ 0.33
MDC1-206ENST00000489540 MTX2O75431 263 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 ACP5P13686 325 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 CLCNKAP51800 687 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 XIAPP98170 497 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 POU6F1Q14863 301 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 CYP1B1Q16678 543 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 SKIDA1Q1XH10 827 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 CERCAMQ5T4B2 595 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 CDCP2Q5VXM1 449 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 LRRTM4Q86VH4 590 aa17.13■□□□□ 0.33
MDC1-206ENST00000489540 DCBLD1Q8N8Z6 715 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms