RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 SLC10A2Q12908 348 aaPredicted RBP12.26□□□□□ -0.45
CPSF3-204ENST00000489403 PDK2Q15119 407 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 NFKBIBQ15653 356 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 ALKBH5Q6P6C2 394 aaKnown RBP12.26□□□□□ -0.45
CPSF3-204ENST00000489403 CEACAM20Q6UY09 585 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 LYSMD3Q7Z3D4 306 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 UNC5BQ8IZJ1 945 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 PQLC3Q8N755 202 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 KCTD6Q8NC69 237 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 SH3KBP1Q96B97 665 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 EID2BQ96D98 161 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 CATSPER2Q96P56 530 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 MLPHQ9BV36 600 aaPredicted RBP12.26□□□□□ -0.45
CPSF3-204ENST00000489403 TBC1D10AQ9BXI6 508 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.26□□□□□ -0.45
CPSF3-204ENST00000489403 CARD9Q9H257 536 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 GPN2Q9H9Y4 310 aaPredicted RBP12.26□□□□□ -0.45
CPSF3-204ENST00000489403 ARFGAP3Q9NP61 516 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 FBXO8Q9NRD0 319 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 DTLQ9NZJ0 730 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 ATXN10Q9UBB4 475 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 KLHL3Q9UH77 587 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 TUBD1Q9UJT1 453 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 NENFQ9UMX5 172 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 TMEM184BQ9Y519 407 aaPredicted RBP12.26□□□□□ -0.45
CPSF3-204ENST00000489403 ADGRG1Q9Y653 693 aa12.26□□□□□ -0.45
CPSF3-204ENST00000489403 KIR2DS5A0A0G2JLQ3 304 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 A0A0G2JNG1 304 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 LILRA5A6NI73 299 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 ANKRD66B4E2M5 251 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 KIR2DS3K7RE56 304 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 CAPN5O15484 640 aaPredicted RBP12.25□□□□□ -0.45
CPSF3-204ENST00000489403 STK17BO94768 372 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 PROSCO94903 275 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 DLGAP3O95886 979 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 PRKAR1AP10644 381 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 ZNF8P17098 575 aaPredicted RBP12.25□□□□□ -0.45
CPSF3-204ENST00000489403 MX2P20592 715 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 MAP4P27816 1152 aaKnown RBP12.25□□□□□ -0.45
CPSF3-204ENST00000489403 MAN1A1P33908 653 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 CCR10P46092 362 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 GFERP55789 205 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 UBE2IP63279 158 aaKnown RBP12.25□□□□□ -0.45
CPSF3-204ENST00000489403 ZBED6P86452 979 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 FANCCQ00597 558 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 ABHD18Q0P651 414 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 CDC20Q12834 499 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 ZBTB17Q13105 803 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 GALNT3Q14435 633 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 KIR2DS5Q14953 304 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 FAM182AQ5T1J6 154 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 ZNF648Q5T619 568 aaPredicted RBP12.25□□□□□ -0.45
CPSF3-204ENST00000489403 CAVIN1Q6NZI2 390 aaKnown RBP12.25□□□□□ -0.45
CPSF3-204ENST00000489403 CCDC13Q8IYE1 715 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 CNTD1Q8N815 330 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 CCNYQ8ND76 341 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 CCHCR1Q8TD31 782 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 CPLX3Q8WVH0 158 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 KIAA1143Q96AT1 154 aaPredicted RBP12.25□□□□□ -0.45
CPSF3-204ENST00000489403 ZPBPQ9BS86 351 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 EPN3Q9H201 632 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 PRDM8Q9NQV8 689 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 SIDT1Q9NXL6 827 aaKnown RBP12.25□□□□□ -0.45
CPSF3-204ENST00000489403 CPNE7Q9UBL6 633 aa12.25□□□□□ -0.45
CPSF3-204ENST00000489403 MN1Q10571 1320 aaPredicted RBP12.25□□□□□ -0.45
CPSF3-204ENST00000489403 RGSL1A5PLK6 1076 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 OR5K4A6NMS3 321 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 KCNK1O00180 336 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 JCHAINP01591 159 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 OAS2P29728 719 aaKnown RBP12.24□□□□□ -0.45
CPSF3-204ENST00000489403 CLCNKAP51800 687 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 PPIDQ08752 370 aaKnown RBP12.24□□□□□ -0.45
CPSF3-204ENST00000489403 SKIDA1Q1XH10 827 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 PLA2G4EQ3MJ16 856 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 ZNF569Q5MCW4 686 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 ALS2CLQ60I27 953 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 PHYKPLQ8IUZ5 450 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 MAP7D3Q8IWC1 876 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 GPR26Q8NDV2 337 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 STARD8Q92502 1023 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 PLEKHG4BQ96PX9 1271 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 EFHD1Q9BUP0 239 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 SPATA16Q9BXB7 569 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 OR2AG1Q9H205 316 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 OSGEPL1Q9H4B0 414 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 EPB41L1Q9H4G0 881 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 KLC4Q9NSK0 619 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 OGFRQ9NZT2 677 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 SCHIP1Q9P0W5 487 aaPredicted RBP12.24□□□□□ -0.45
CPSF3-204ENST00000489403 CTTNBP2NLQ9P2B4 639 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 CAPN11Q9UMQ6 739 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 RELNP78509 3460 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 COL12A1Q99715 3063 aa12.24□□□□□ -0.45
CPSF3-204ENST00000489403 UBR5O95071 2799 aaPredicted RBP12.23□□□□□ -0.45
CPSF3-204ENST00000489403 POLR1CO15160 346 aaPredicted RBP12.23□□□□□ -0.45
CPSF3-204ENST00000489403 SLC25A14O95258 325 aaPredicted RBP12.23□□□□□ -0.45
CPSF3-204ENST00000489403 C9P02748 559 aa12.23□□□□□ -0.45
CPSF3-204ENST00000489403 GYPCP04921 128 aa12.23□□□□□ -0.45
CPSF3-204ENST00000489403 KRT7P08729 469 aa12.23□□□□□ -0.45
CPSF3-204ENST00000489403 ANKRD34CP0C6C1 535 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms