RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 RETREG1Q9H6L5 497 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 GPAMQ9HCL2 828 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 ATP13A2Q9NQ11 1180 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 CCM2LQ9NUG4 571 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-233ENST00000489352 NDFIP2Q9NV92 336 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 OGFRQ9NZT2 677 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 MAPK8IP1Q9UQF2 711 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 CSAG2Q9Y5P2 127 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 MORC2Q9Y6X9 1032 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-233ENST00000489352 NCOA6Q14686 2063 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-233ENST00000489352 MEN1O00255 615 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 PCDH17O14917 1159 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 LDB2O43679 373 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 KLRC4O43908 158 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 RHOQP17081 205 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 MEOX1P50221 254 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 SLC6A3Q01959 620 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 BCL2L1Q07817 233 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 CETN1Q12798 172 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 CLEC9AQ6UXN8 241 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 FAM183BPQ6ZVS7 135 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 ZSWIM9Q86XI8 627 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 TTC30BQ8N4P2 665 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 CPT1BQ92523 772 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 SHC3Q92529 594 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 UBXN4Q92575 508 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 NINJ1Q92982 152 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 COQ10AQ96MF6 247 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 USP28Q96RU2 1077 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 NPY6RQ99463 290 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 SLC7A5P2Q9GIP4 190 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 EPS8L2Q9H6S3 715 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 UCK1Q9HA47 277 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 METTL14Q9HCE5 456 aaKnown RBP11.35□□□□□ -0.59
HDAC6-233ENST00000489352 DLL4Q9NR61 685 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 KCND1Q9NSA2 647 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 KCNK6Q9Y257 313 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 PCDHGC4Q9Y5F7 938 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 VPS13CQ709C8 3753 aa11.35□□□□□ -0.59
HDAC6-233ENST00000489352 FBN1P35555 2871 aaKnown RBP11.34□□□□□ -0.59
HDAC6-233ENST00000489352 C9J4A7 227 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 UNC5CO95185 931 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 EBLN1P0CF75 366 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 GM2AP17900 193 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 TFE3P19532 575 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-233ENST00000489352 ETV3P41162 512 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 PAK1Q13153 545 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 CEBPEQ15744 281 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 AGAP7PQ5VUJ5 663 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 TMEM26Q6ZUK4 368 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 RRAGAQ7L523 313 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 SLC26A9Q7LBE3 791 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 MRGPREQ86SM8 312 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 PHYKPLQ8IUZ5 450 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 DSELQ8IZU8 1212 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 OR8K5Q8NH50 307 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 DNAJB8Q8NHS0 232 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 FNIP1Q8TF40 1166 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 ZNF606Q8WXB4 792 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 PGAP3Q96FM1 320 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-233ENST00000489352 TMX3Q96JJ7 454 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 AGAP4Q96P64 663 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 CPXM1Q96SM3 734 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 ENKD1Q9H0I2 346 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 TMEM248Q9NWD8 314 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 LHX3Q9UBR4 397 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 OR12D3Q9UGF7 316 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 EDARQ9UNE0 448 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 BTRCQ9Y297 605 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 SLC30A1Q9Y6M5 507 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 MXRA5Q9NR99 2828 aa11.34□□□□□ -0.59
HDAC6-233ENST00000489352 SEC16AO15027 2179 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 IGHV5-51A0A0C4DH38 117 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 TEAD1P28347 426 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 GNA15P30679 374 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 CAPZBP47756 277 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 MCCD1P59942 119 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-233ENST00000489352 TUBB4BP68371 445 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 ADORA2A-AS1P86434 159 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 TUBB2AQ13885 445 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 SSPNQ14714 243 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 CYP2A13Q16696 494 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 SLC25A52Q3SY17 297 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 OLFML1Q6UWY5 402 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 NR4A3Q92570 626 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 KAT5Q92993 513 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 DTD2Q96FN9 168 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 PCMTD1Q96MG8 357 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-233ENST00000489352 LRFN5Q96NI6 719 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 TBCBQ99426 244 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 SMR3AQ99954 134 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 ZNF559Q9BR84 538 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 TUBB2BQ9BVA1 445 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 GTPBP4Q9BZE4 634 aaKnown RBP11.33□□□□□ -0.6
HDAC6-233ENST00000489352 TNFRSF10DQ9UBN6 386 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 UBA2Q9UBT2 640 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-233ENST00000489352 B4GALT6Q9UBX8 382 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 SEC14L3Q9UDX4 400 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 PRKAB1Q9Y478 270 aa11.33□□□□□ -0.6
HDAC6-233ENST00000489352 SPTBP11277 2137 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms