RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ADARP55265 1226 aaKnown RBP12.64□□□□□ -0.39
NELFE-209ENST00000488426 KDSRQ06136 332 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 SRSF5Q13243 272 aaKnown RBP12.64□□□□□ -0.39
NELFE-209ENST00000488426 ZNF528Q3MIS6 628 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 ZRANB3Q5FWF4 1079 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 ZDHHC20Q5W0Z9 365 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 ZNF549Q6P9A3 640 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 CRTC1Q6UUV9 634 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 MAMSTRQ6ZN01 415 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 GRIN3AQ8TCU5 1115 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 UCMAQ8WVF2 138 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 KCTD4Q8WVF5 259 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 PLCD4Q9BRC7 762 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 TSSK1BQ9BXA7 367 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 CCDC68Q9H2F9 335 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 ZNF358Q9NW07 568 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 DKK3Q9UBP4 350 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 COMMD10Q9Y6G5 202 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 LAMA1P25391 3075 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 CEP250Q9BV73 2442 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 EDDM13A0A1B0GTR0 161 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 LEFTY1O75610 366 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 WISP3O95389 354 aaPredicted RBP12.63□□□□□ -0.39
NELFE-209ENST00000488426 LMNAP02545 664 aaKnown RBP12.63□□□□□ -0.39
NELFE-209ENST00000488426 ZNF30P17039 623 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 ALDH3A1P30838 453 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 GMPRP36959 345 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 SPAM1P38567 509 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 PTGER3P43115 390 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 CXCL12P48061 93 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 PXNP49023 591 aaPredicted RBP12.63□□□□□ -0.39
NELFE-209ENST00000488426 CDKN2DP55273 166 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 IRX4P78413 519 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 ZNF460Q14592 562 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 CHI3L2Q15782 390 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 FAM83EQ2M2I3 478 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 FNDC3BQ53EP0 1204 aaKnown RBP12.63□□□□□ -0.39
NELFE-209ENST00000488426 ZNF805Q5CZA5 627 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 LYPLAL1Q5VWZ2 237 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 CGB2Q6NT52 195 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 PSAPL1Q6NUJ1 521 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 FOXR1Q6PIV2 292 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 OTOAQ7RTW8 1153 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 PIANPQ8IYJ0 282 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 SPEM1Q8N4L4 309 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 SREK1Q8WXA9 508 aaKnown RBP12.63□□□□□ -0.39
NELFE-209ENST00000488426 TTC1Q99614 292 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 GPAMQ9HCL2 828 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 RUVBL2Q9Y230 463 aaKnown RBP12.63□□□□□ -0.39
NELFE-209ENST00000488426 A0A0U1RQS6 177 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 UBA6A0AVT1 1052 aaPredicted RBP12.63□□□□□ -0.39
NELFE-209ENST00000488426 LILRB5O75023 590 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 H2AFYO75367 372 aaKnown RBP12.63□□□□□ -0.39
NELFE-209ENST00000488426 SRP72O76094 671 aaKnown RBP12.63□□□□□ -0.39
NELFE-209ENST00000488426 PRAMEF1O95521 474 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 LTA4HP09960 611 aaKnown RBP12.63□□□□□ -0.39
NELFE-209ENST00000488426 PRSS56P0CW18 603 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 TROVE2P10155 538 aaKnown RBP eCLIP12.63□□□□□ -0.39
NELFE-209ENST00000488426 CYP2A6P11509 494 aaPredicted RBP12.63□□□□□ -0.39
NELFE-209ENST00000488426 BPIP17213 487 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 ITGALP20701 1170 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 CD9P21926 228 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 GRK2P25098 689 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 LPAL2Q16609 132 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 HNRNPA1L2Q32P51 320 aaKnown RBP12.63□□□□□ -0.39
NELFE-209ENST00000488426 GPR33Q49SQ1 333 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 ARSIQ5FYB1 569 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 AGAP9Q5VTM2 703 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 LRRC66Q68CR7 880 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 LRRC8EQ6NSJ5 796 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 KLC3Q6P597 504 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 NUDT18Q6ZVK8 323 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 SNX20Q7Z614 316 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 TSPAN33Q86UF1 283 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 PPP1R14CQ8TAE6 165 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 UBXN10Q96LJ8 280 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 C7orf26Q96N11 449 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 GPR78Q96P69 363 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 ZSCAN32Q9NX65 697 aa12.63□□□□□ -0.39
NELFE-209ENST00000488426 TRBV5-4A0A0C4DH59 114 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 GLYATL1P3A0A0U1RQE8 302 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 UPK3BL1B0FP48 263 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 CHURC1-FNTBB4DL54 471 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 UPK3BL2E5RIL1 263 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 G3V2L1 256 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 GAPDHSO14556 408 aaPredicted RBP12.62□□□□□ -0.39
NELFE-209ENST00000488426 HRO43593 1189 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 TGDSO95455 350 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 PRNPP04156 253 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 SERPINE1P05121 402 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 CTSLP07711 333 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 FGF3P11487 239 aaPredicted RBP12.62□□□□□ -0.39
NELFE-209ENST00000488426 VIPR1P32241 457 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 FNTBP49356 437 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 PRKAA2P54646 552 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 BST1Q10588 318 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 STX3Q13277 289 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 E2F5Q15329 346 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 ZYG11AQ6WRX3 759 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 TAS2R42Q7RTR8 314 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms