RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 TMEM71Q6P5X7 295 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 IYDQ6PHW0 289 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 B4GALNT4Q76KP1 1039 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 TMC3Q7Z5M5 1100 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 CCDC112Q8NEF3 446 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 SH3KBP1Q96B97 665 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 TADA1Q96BN2 335 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 SGF29Q96ES7 293 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 TAAR9Q96RI9 348 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 ZSCAN5AQ9BUG6 496 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 GPR63Q9BZJ6 419 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 ZMYND15Q9H091 742 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 STN1Q9H668 368 aaKnown RBP22.37■■□□□ 1.17
PTPN4-211ENST00000488279 GLOD4Q9HC38 313 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 TRIM39Q9HCM9 518 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 ATXN10Q9UBB4 475 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 KCNK6Q9Y257 313 aa22.37■■□□□ 1.17
PTPN4-211ENST00000488279 PIRTP0C851 137 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 THRAP10827 490 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 SLC2A4P14672 509 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 CSF2RBP32927 897 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 CDKN2BP42772 138 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 NOP2P46087 812 aaKnown RBP22.36■■□□□ 1.17
PTPN4-211ENST00000488279 DCDC1P59894 354 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 HHEXQ03014 270 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 TBX2Q13207 712 aaPredicted RBP22.36■■□□□ 1.17
PTPN4-211ENST00000488279 LY6DQ14210 128 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 ZNF569Q5MCW4 686 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.36■■□□□ 1.17
PTPN4-211ENST00000488279 ALS2CLQ60I27 953 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 ZNF761Q86XN6 746 aaPredicted RBP22.36■■□□□ 1.17
PTPN4-211ENST00000488279 DTX1Q86Y01 620 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 GPR26Q8NDV2 337 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 SPATA22Q8NHS9 363 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 TFB1MQ8WVM0 346 aaKnown RBP22.36■■□□□ 1.17
PTPN4-211ENST00000488279 SRPK1Q96SB4 655 aaKnown RBP22.36■■□□□ 1.17
PTPN4-211ENST00000488279 HERPUD2Q9BSE4 406 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 SARS2Q9NP81 518 aaKnown RBP22.36■■□□□ 1.17
PTPN4-211ENST00000488279 AHCTF1Q8WYP5 2266 aa22.36■■□□□ 1.17
PTPN4-211ENST00000488279 A0A0A6YYK5 440 aaPredicted RBP22.35■■□□□ 1.17
PTPN4-211ENST00000488279 GPR89AB7ZAQ6 455 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 DUX1O43812 170 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 SNX2O60749 519 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 MT-CYBP00156 380 aaPredicted RBP22.35■■□□□ 1.17
PTPN4-211ENST00000488279 SLC4A1P02730 911 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 GPR89BP0CG08 455 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 ZNF8P17098 575 aaPredicted RBP22.35■■□□□ 1.17
PTPN4-211ENST00000488279 NFATC2Q13469 925 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 PDPK2PQ6A1A2 396 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 SLC9B2Q86UD5 537 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 PHYKPLQ8IUZ5 450 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 TRAM1L1Q8N609 369 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 TEKT5Q96M29 485 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 OR2AG1Q9H205 316 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 ARFGAP3Q9NP61 516 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 TMEM9Q9P0T7 183 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 PDP2Q9P2J9 529 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 SAE1Q9UBE0 346 aaPredicted RBP22.35■■□□□ 1.17
PTPN4-211ENST00000488279 ZNF711Q9Y462 761 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 PCDHGA3Q9Y5H0 932 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 ALG6Q9Y672 507 aa22.35■■□□□ 1.17
PTPN4-211ENST00000488279 KIR2DS5A0A0G2JLQ3 304 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 A0A0G2JNG1 304 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 OR5K4A6NMS3 321 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.34■■□□□ 1.17
PTPN4-211ENST00000488279 STMND1H3BQB6 276 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 KIR2DS3K7RE56 304 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 PSTPIP1O43586 416 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 CST8O60676 142 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 PMPCBO75439 489 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 NDST3O95803 873 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 F3P13726 295 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 PTPN3P26045 913 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 MAGEA1P43355 309 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 SRSF6Q13247 344 aaKnown RBP22.34■■□□□ 1.17
PTPN4-211ENST00000488279 KIR2DS5Q14953 304 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 PRKD1Q15139 912 aaPredicted RBP22.34■■□□□ 1.17
PTPN4-211ENST00000488279 TAZQ16635 292 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 KAZNQ674X7 775 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 WDR74Q6RFH5 385 aaPredicted RBP22.34■■□□□ 1.17
PTPN4-211ENST00000488279 ZSCAN1Q8NBB4 408 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 MED8Q96G25 268 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.34■■□□□ 1.17
PTPN4-211ENST00000488279 SEMA4CQ9C0C4 833 aa22.34■■□□□ 1.17
PTPN4-211ENST00000488279 NFKBIL1Q9UBC1 381 aaPredicted RBP22.34■■□□□ 1.17
PTPN4-211ENST00000488279 A6NCN8 305 aa22.33■■□□□ 1.17
PTPN4-211ENST00000488279 CLCNKAP51800 687 aa22.33■■□□□ 1.17
PTPN4-211ENST00000488279 HADHBP55084 474 aaKnown RBP22.33■■□□□ 1.17
PTPN4-211ENST00000488279 LLGL1Q15334 1064 aa22.33■■□□□ 1.17
PTPN4-211ENST00000488279 ZNF648Q5T619 568 aaPredicted RBP22.33■■□□□ 1.17
PTPN4-211ENST00000488279 VASH2Q86V25 355 aa22.33■■□□□ 1.17
PTPN4-211ENST00000488279 AVL9Q8NBF6 648 aa22.33■■□□□ 1.17
PTPN4-211ENST00000488279 P3H4Q92791 437 aa22.33■■□□□ 1.17
PTPN4-211ENST00000488279 GLYATL1Q969I3 302 aa22.33■■□□□ 1.17
PTPN4-211ENST00000488279 ASPSCR1Q9BZE9 553 aa22.33■■□□□ 1.17
PTPN4-211ENST00000488279 KLC4Q9NSK0 619 aa22.33■■□□□ 1.17
PTPN4-211ENST00000488279 SLC39A1Q9NY26 324 aa22.33■■□□□ 1.17
PTPN4-211ENST00000488279 UBP1Q9NZI7 540 aa22.33■■□□□ 1.17
PTPN4-211ENST00000488279 MTSS1O43312 755 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 ZRANB2O95218 330 aaKnown RBP eCLIP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms