RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 ALDH4A1P30038 563 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 HMGCLP35914 325 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 LSSP48449 732 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 PDX1P52945 283 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 PDPK2PQ6A1A2 396 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 B3GNT8Q7Z7M8 397 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 TTC30BQ8N4P2 665 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 CCDC112Q8NEF3 446 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 GRAMD1AQ96CP6 724 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 SPATA13Q96N96 652 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 GORASP1Q9BQQ3 440 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 CARD9Q9H257 536 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 AGRPO00253 132 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 GRID2O43424 1007 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 NUAK1O60285 661 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 MTX2O75431 263 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 OLIG2Q13516 323 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 TBC1D25Q3MII6 688 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 PLA2G4EQ3MJ16 856 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 AMZ1Q400G9 498 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 MAP9Q49MG5 647 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 SEL1L2Q5TEA6 688 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 CRTC3Q6UUV7 619 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 ADGRG6Q86SQ4 1221 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 C17orf82Q86X59 251 aaPredicted RBP23.47■■□□□ 1.35
RNF38-208ENST00000488058 LSMEM2Q8N112 164 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 GDAP1Q8TB36 358 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 PLEKHG4BQ96PX9 1271 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 TRIM39Q9HCM9 518 aa23.47■■□□□ 1.35
RNF38-208ENST00000488058 AAR2Q9Y312 384 aaKnown RBP23.47■■□□□ 1.35
RNF38-208ENST00000488058 CCDC187A0A096LP49 1063 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 TCRBV7S2A1N4TA0A589 114 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 SNX2O60749 519 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 APC2O95996 2303 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 RBMS1P29558 406 aaKnown RBP23.46■■□□□ 1.35
RNF38-208ENST00000488058 SPAM1P38567 509 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 PPM1FP49593 454 aaPredicted RBP23.46■■□□□ 1.35
RNF38-208ENST00000488058 INHBCP55103 352 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 OR1D5P58170 312 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 ACACAQ13085 2346 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 LRRC69Q6ZNQ3 347 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 WDR36Q8NI36 951 aaKnown RBP23.46■■□□□ 1.35
RNF38-208ENST00000488058 FGF11Q92914 225 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 STRADBQ9C0K7 418 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 LHX6Q9UPM6 363 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 R3HDM2Q9Y2K5 976 aaKnown RBP23.46■■□□□ 1.35
RNF38-208ENST00000488058 PKP3Q9Y446 797 aa23.46■■□□□ 1.35
RNF38-208ENST00000488058 KIF26BQ2KJY2 2108 aa23.45■■□□□ 1.35
RNF38-208ENST00000488058 A0A1W2PNU3 283 aaPredicted RBP23.45■■□□□ 1.34
RNF38-208ENST00000488058 PMS2P1A4D2B8 440 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 B4GALNT1Q00973 533 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 KLF1Q13351 362 aaPredicted RBP23.45■■□□□ 1.34
RNF38-208ENST00000488058 COL28A1Q2UY09 1125 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 ATP13A5Q4VNC0 1218 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 FAM151BQ6UXP7 276 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 ARHGEF18Q6ZSZ5 1173 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 FAM71DQ8N9W8 422 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 TMEM74Q96NL1 305 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 OSGEPL1Q9H4B0 414 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 LZTFL1Q9NQ48 299 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 IL17CQ9P0M4 197 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 RALYQ9UKM9 306 aaKnown RBP23.45■■□□□ 1.34
RNF38-208ENST00000488058 WDFY3Q8IZQ1 3526 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 ADAMTS20P59510 1910 aa23.45■■□□□ 1.34
RNF38-208ENST00000488058 UNC13CQ8NB66 2214 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 STX7O15400 261 aaKnown RBP23.44■■□□□ 1.34
RNF38-208ENST00000488058 RRP8O43159 456 aaKnown RBP23.44■■□□□ 1.34
RNF38-208ENST00000488058 ZW10O43264 779 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 B4GAT1O43505 415 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 ZNF189O75820 626 aaPredicted RBP23.44■■□□□ 1.34
RNF38-208ENST00000488058 EML2O95834 649 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 CCDC175P0C221 793 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 EIF2S3P41091 472 aaKnown RBP23.44■■□□□ 1.34
RNF38-208ENST00000488058 CCDC173Q0VFZ6 552 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 SPARCL1Q14515 664 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 INSCQ1MX18 579 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 ZDHHC20Q5W0Z9 365 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 SNIP1Q8TAD8 396 aaKnown RBP23.44■■□□□ 1.34
RNF38-208ENST00000488058 SLC37A2Q8TED4 501 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 NAF1Q96HR8 494 aaKnown RBP23.44■■□□□ 1.34
RNF38-208ENST00000488058 ZNF578Q96N58 590 aaPredicted RBP23.44■■□□□ 1.34
RNF38-208ENST00000488058 ZMYND15Q9H091 742 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 RDH14Q9HBH5 336 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 IL26Q9NPH9 171 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 TBC1D29Q9UFV1 150 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 ARL5AQ9Y689 179 aa23.44■■□□□ 1.34
RNF38-208ENST00000488058 URB1O60287 2271 aaKnown RBP23.44■■□□□ 1.34
RNF38-208ENST00000488058 A0A087WV48 116 aa23.43■■□□□ 1.34
RNF38-208ENST00000488058 GLYATL1P3A0A0U1RQE8 302 aa23.43■■□□□ 1.34
RNF38-208ENST00000488058 TMX2-CTNND1H3BSU7 103 aa23.43■■□□□ 1.34
RNF38-208ENST00000488058 PPM1DO15297 605 aa23.43■■□□□ 1.34
RNF38-208ENST00000488058 CDK14O94921 469 aa23.43■■□□□ 1.34
RNF38-208ENST00000488058 ABCG1P45844 678 aa23.43■■□□□ 1.34
RNF38-208ENST00000488058 GTF2H3Q13889 308 aa23.43■■□□□ 1.34
RNF38-208ENST00000488058 PTPRCAPQ14761 206 aa23.43■■□□□ 1.34
RNF38-208ENST00000488058 CHRNA6Q15825 494 aa23.43■■□□□ 1.34
RNF38-208ENST00000488058 PHF19Q5T6S3 580 aa23.43■■□□□ 1.34
RNF38-208ENST00000488058 USP53Q70EK8 1073 aa23.43■■□□□ 1.34
RNF38-208ENST00000488058 ZNF438Q7Z4V0 828 aa23.43■■□□□ 1.34
RNF38-208ENST00000488058 LRRTM4Q86VH4 590 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms