RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 APBB3O95704 486 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 PTBP3O95758 552 aaKnown RBP3.59□□□□□ -1.84
HFM1-208ENST00000488023 ALPPP05187 535 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 HOXB5P09067 269 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 ALPPL2P10696 532 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 ENGP17813 658 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 EPORP19235 508 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 DRD4P21917 467 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 TGM2P21980 687 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 IL10P22301 178 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 CD27P26842 260 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 SLC16A2P36021 539 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 RARRES1P49788 294 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 TFAP4Q01664 338 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 SLC18A2Q05940 514 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 ITIH3Q06033 890 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 MFSD13AQ14CX5 517 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 SF3B3Q15393 1217 aaKnown RBP3.59□□□□□ -1.84
HFM1-208ENST00000488023 HSPB2Q16082 182 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 ATP13A5Q4VNC0 1218 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 RNASE12Q5GAN4 147 aaKnown RBP3.59□□□□□ -1.84
HFM1-208ENST00000488023 SFMBT2Q5VUG0 894 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 ETFRF1Q6IPR1 90 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 VWA1Q6PCB0 445 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 NHLRC1Q6VVB1 395 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 LDB1Q86U70 411 aaPredicted RBP3.59□□□□□ -1.84
HFM1-208ENST00000488023 CEP57Q86XR8 500 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 KLBQ86Z14 1044 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 SLC35F3Q8IY50 421 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 RNF168Q8IYW5 571 aaPredicted RBP3.59□□□□□ -1.84
HFM1-208ENST00000488023 ZCCHC9Q8N567 271 aaKnown RBP3.59□□□□□ -1.84
HFM1-208ENST00000488023 BOLLQ8N9W6 283 aaKnown RBP3.59□□□□□ -1.84
HFM1-208ENST00000488023 LPCAT1Q8NF37 534 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 SPATA18Q8TC71 538 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 ROBO4Q8WZ75 1007 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 IGSF8Q969P0 613 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 ST6GALNAC6Q969X2 333 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 RMDN2Q96LZ7 410 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 CAMK1GQ96NX5 476 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 SIN3AQ96ST3 1273 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 SH3GL2Q99962 352 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 IFT27Q9BW83 186 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 RTN4RQ9BZR6 473 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 SPATC1LQ9H0A9 340 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 BPIFA1Q9NP55 256 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 PRMT7Q9NVM4 692 aaPredicted RBP3.59□□□□□ -1.84
HFM1-208ENST00000488023 SEMA5BQ9P283 1151 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 CARD8Q9Y2G2 431 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 TEX264Q9Y6I9 313 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 CLCA3PQ9Y6N3 262 aa3.59□□□□□ -1.84
HFM1-208ENST00000488023 ARHGEF40Q8TER5 1519 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 UTYO14607 1347 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 SYNJ2BP-COX16A0A087WUM0 186 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 KLRF2D3W0D1 207 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 CLIC1O00299 241 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 ATP2A1O14983 1001 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 ZBTB43O43298 467 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 CHRM2P08172 466 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 CYP2D6P10635 497 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 ACTN1P12814 892 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 APEHP13798 732 aaKnown RBP3.58□□□□□ -1.84
HFM1-208ENST00000488023 TCF4P15884 667 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 PFKFB1P16118 471 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 PRLRP16471 622 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 ITIH1P19827 911 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 SP100P23497 879 aaPredicted RBP3.58□□□□□ -1.84
HFM1-208ENST00000488023 PCSK6P29122 969 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 RYKP34925 604 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 PLA2G5P39877 138 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 KHKP50053 298 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 CLCN5P51795 746 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 PTENP60484 403 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 HNRNPKP61978 463 aaKnown RBP eCLIP3.58□□□□□ -1.84
HFM1-208ENST00000488023 KCNJ10P78508 379 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 PPP2R2BQ00005 443 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 SORDQ00796 357 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 CFHR3Q02985 330 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 GFPT1Q06210 699 aaPredicted RBP3.58□□□□□ -1.84
HFM1-208ENST00000488023 RABEP1Q15276 862 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 SGCBQ16585 318 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 VWC2Q2TAL6 325 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 SOWAHCQ53LP3 525 aaPredicted RBP3.58□□□□□ -1.84
HFM1-208ENST00000488023 PLA2G4FQ68DD2 849 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 DHRS13Q6UX07 377 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 RANBP10Q6VN20 620 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 TSPAN33Q86UF1 283 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 TRIM74Q86UV6 250 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 TRIM73Q86UV7 250 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 ARID3BQ8IVW6 561 aaPredicted RBP3.58□□□□□ -1.84
HFM1-208ENST00000488023 HUS1BQ8NHY5 278 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 FBXO30Q8TB52 745 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 ATOH1Q92858 354 aaPredicted RBP3.58□□□□□ -1.84
HFM1-208ENST00000488023 CELF1Q92879 486 aaKnown RBP3.58□□□□□ -1.84
HFM1-208ENST00000488023 EXT2Q93063 718 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 ZC3HAV1LQ96H79 300 aaKnown RBP3.58□□□□□ -1.84
HFM1-208ENST00000488023 PDLIM2Q96JY6 352 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 GAL3ST4Q96RP7 486 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 TMEM47Q9BQJ4 181 aa3.58□□□□□ -1.84
HFM1-208ENST00000488023 RNF26Q9BY78 433 aaPredicted RBP3.58□□□□□ -1.84
HFM1-208ENST00000488023 OSBPL8Q9BZF1 889 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms