RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 HGSO14964 777 aaPredicted RBP11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 NVLO15381 856 aaKnown RBP11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 EFSO43281 561 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 NUAK1O60285 661 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 CST8O60676 142 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 NDST3O95803 873 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 LIPCP11150 499 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 ACP5P13686 325 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 NFKB1P19838 968 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 FECHP22830 423 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 ALDH4A1P30038 563 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 LIMK2P53671 638 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 NOMO1Q15155 1222 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 CLPPQ16740 277 aaPredicted RBP11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 TEX44Q53QW1 395 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 ZNF648Q5T619 568 aaPredicted RBP11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 NKAIN2Q5VXU1 208 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 KDELC1Q6UW63 502 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 KDELC2Q7Z4H8 507 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 TMC3Q7Z5M5 1100 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 PIM3Q86V86 326 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 LSM14AQ8ND56 463 aaKnown RBP11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 OR4D9Q8NGE8 314 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 HAUS1Q96CS2 278 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 OXNAD1Q96HP4 312 aaPredicted RBP11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 TEKT5Q96M29 485 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 CMKLR1Q99788 373 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 GORASP1Q9BQQ3 440 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 SEMA4CQ9C0C4 833 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 CARD9Q9H257 536 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 ZFYVE1Q9HBF4 777 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 MAGEE1Q9HCI5 957 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 UBP1Q9NZI7 540 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 ATXN10Q9UBB4 475 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 TMPRSS11EQ9UL52 423 aa11.1□□□□□ -0.63
RAB11FIP3-210ENST00000487899 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 GPR39O43194 453 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 PMPCBO75439 489 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 ASMTLO95671 621 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 CCL4P13236 92 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 F3P13726 295 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 ZNF8P17098 575 aaPredicted RBP11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 BPIP17213 487 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 MAGEA1P43355 309 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 CHRNA4P43681 627 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 NR2C2P49116 596 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 GPLD1P80108 840 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 RHDQ02161 417 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 HHEXQ03014 270 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 CDK18Q07002 472 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 SQSTM1Q13501 440 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 PEX6Q13608 980 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 TFDP2Q14188 446 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 TFDP3Q5H9I0 405 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 KIAA1614Q5VZ46 1190 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 PDPK2PQ6A1A2 396 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 USP53Q70EK8 1073 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 CHST15Q7LFX5 561 aaPredicted RBP11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 DTX1Q86Y01 620 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 ZNF567Q8N184 647 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 ZNF843Q8N446 348 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 TRAM1L1Q8N609 369 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 BMPERQ8N8U9 685 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 CCHCR1Q8TD31 782 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 TFB1MQ8WVM0 346 aaKnown RBP11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 CCNL2Q96S94 520 aaPredicted RBP11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 ZSCAN5AQ9BUG6 496 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 MAK16Q9BXY0 300 aaKnown RBP11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 TRIM5Q9C035 493 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 OR2AG1Q9H205 316 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 RMI1Q9H9A7 625 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 SARS2Q9NP81 518 aaKnown RBP11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 KCNK4Q9NYG8 393 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 ZNHIT2Q9UHR6 403 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 REXO2Q9Y3B8 237 aaKnown RBP11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 ALG6Q9Y672 507 aa11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 UBR5O95071 2799 aaPredicted RBP11.09□□□□□ -0.63
RAB11FIP3-210ENST00000487899 LOC285095A0A1B0GVY8 99 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SOWAHDA6NJG2 315 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 F5H423 210 aaPredicted RBP11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 GAPDHSO14556 408 aaPredicted RBP11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 CHUKO15111 745 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 GRID2O43424 1007 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 DUX1O43812 170 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 MTX2O75431 263 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 FGF3P11487 239 aaPredicted RBP11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 WT1P19544 449 aaPredicted RBP11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 CTNNA1P35221 906 aaKnown RBP11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 MAPK10P53779 464 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 UBE2IP63279 158 aaKnown RBP11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 TRA2AQ13595 282 aaKnown RBP eCLIP11.08□□□□□ -0.648e-6■□□□□ 10.6
RAB11FIP3-210ENST00000487899 PPP2R5EQ16537 467 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 PLA2G4EQ3MJ16 856 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SIRPB2Q5JXA9 342 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 KAZNQ674X7 775 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 CRTC3Q6UUV7 619 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 CCDC81Q6ZN84 652 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 BBS12Q6ZW61 710 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ADGRG6Q86SQ4 1221 aa11.08□□□□□ -0.64
RAB11FIP3-210ENST00000487899 VASH2Q86V25 355 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms