RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 MARCH9Q86YJ5 346 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 RNF152Q8N8N0 203 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 ENAHQ8N8S7 591 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-217ENST00000487825 ESR2Q92731 530 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 GRAMD1AQ96CP6 724 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 NXPE2Q96DL1 559 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 PIGSQ96S52 555 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 TBCBQ99426 244 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 COLEC11Q9BWP8 271 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 KRTAP1-5Q9BYS1 174 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 GCOM2Q9BZD3 368 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-217ENST00000487825 TRIM4Q9C037 500 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 FAM234AQ9H0X4 552 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 MOV10Q9HCE1 1003 aaKnown RBP4.91□□□□□ -1.62
BRCA1-217ENST00000487825 ZNF302Q9NR11 478 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 ZBTB40Q9NUA8 1239 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 AGPAT5Q9NUQ2 364 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 MYO1AQ9UBC5 1043 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 MAD2L2Q9UI95 211 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 PILRBQ9UKJ0 227 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 ATXN2Q99700 1313 aaKnown RBP4.91□□□□□ -1.62
BRCA1-217ENST00000487825 CSMD1Q96PZ7 3565 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 POLQO75417 2590 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 SETD2Q9BYW2 2564 aaPredicted RBP4.9□□□□□ -1.62
BRCA1-217ENST00000487825 CELSR1Q9NYQ6 3014 aa4.9□□□□□ -1.62
BRCA1-217ENST00000487825 IGKV2D-30A0A075B6S6 120 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 CCDC187A0A096LP49 1063 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 APOL1O14791 398 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 CYTH3O43739 400 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 UGDHO60701 494 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 USP12O75317 370 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 OAZ2O95190 189 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 SERPINF2P08697 491 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 HLA-EP13747 358 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 MLH1P40692 756 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 PTGER3P43115 390 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 SLC12A2P55011 1212 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 B4GALNT1Q00973 533 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 TLE3Q04726 772 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 GFPT1Q06210 699 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-217ENST00000487825 GRSF1Q12849 480 aaKnown RBP eCLIP4.9□□□□□ -1.63
BRCA1-217ENST00000487825 DMC1Q14565 340 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 GRM4Q14833 912 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 SMAD1Q15797 465 aaKnown RBP4.9□□□□□ -1.63
BRCA1-217ENST00000487825 DUOXA1Q1HG43 343 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.9□□□□□ -1.63
BRCA1-217ENST00000487825 SPDYCQ5MJ68 293 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 MANEAQ5SRI9 462 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 MFSD6Q6ZSS7 791 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 LPCAT2Q7L5N7 544 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 TBC1D10CQ8IV04 446 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 ITPRIPQ8IWB1 547 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 UEVLDQ8IX04 471 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 CEP76Q8TAP6 659 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 MPLKIPQ8TAP9 179 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 SLC25A28Q96A46 364 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 MED8Q96G25 268 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 CNOT6LQ96LI5 555 aaKnown RBP4.9□□□□□ -1.63
BRCA1-217ENST00000487825 NLRP4Q96MN2 994 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 EIF3CQ99613 913 aaKnown RBP4.9□□□□□ -1.63
BRCA1-217ENST00000487825 GATA5Q9BWX5 397 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-217ENST00000487825 RNF26Q9BY78 433 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-217ENST00000487825 UBN1Q9NPG3 1134 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 MAN2B2Q9Y2E5 1009 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 CENPEQ02224 2701 aa4.9□□□□□ -1.63
BRCA1-217ENST00000487825 TLN1Q9Y490 2541 aaKnown RBP4.9□□□□□ -1.63
BRCA1-217ENST00000487825 DNHD1Q96M86 4753 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 CELSR2Q9HCU4 2923 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 A0A1W2PPC4 97 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 FAM149AA5PLN7 773 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 ARL5CA6NH57 179 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 TRDMT1O14717 391 aaKnown RBP4.89□□□□□ -1.63
BRCA1-217ENST00000487825 EGFP01133 1207 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 PECAM1P16284 738 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-217ENST00000487825 TNFRSF1BP20333 461 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 MMP8P22894 467 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 CCKARP32238 428 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 OR1D2P34982 312 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 GSTM5P46439 218 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 AGTR2P50052 363 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 HAND2P61296 217 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 DRP2Q13474 957 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 FBXO43Q4G163 708 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 FAM171A1Q5VUB5 890 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 LYSMD4Q5XG99 296 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 CCDC144NLQ6NUI1 221 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 TLDC1Q6P9B6 456 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 CATSPER4Q7RTX7 472 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 HAUS6Q7Z4H7 955 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 RABEPKQ7Z6M1 372 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 ZNF410Q86VK4 478 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 RFX6Q8HWS3 928 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 FAM9BQ8IZU0 186 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 LEMD2Q8NC56 503 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 CNNM3Q8NE01 707 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 TSTD1Q8NFU3 115 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 RPLP0P6Q8NHW5 317 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 OLIG1Q8TAK6 271 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 BCAS4Q8TDM0 211 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 ADAMTS15Q8TE58 950 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms