RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 B3GNT4Q9C0J1 378 aa18.9■□□□□ 0.62
CLIP2-206ENST00000487091 CPNE5Q9HCH3 593 aa18.9■□□□□ 0.62
CLIP2-206ENST00000487091 TRIM39Q9HCM9 518 aa18.9■□□□□ 0.62
CLIP2-206ENST00000487091 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.9■□□□□ 0.62
CLIP2-206ENST00000487091 ATXN10Q9UBB4 475 aa18.9■□□□□ 0.62
CLIP2-206ENST00000487091 FASNP49327 2511 aaKnown RBP18.89■□□□□ 0.61
CLIP2-206ENST00000487091 IGHV1OR21-1A0A087WYE8 117 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 LOC285095A0A1B0GVY8 99 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 EIF4E1BA6NMX2 242 aaKnown RBP18.89■□□□□ 0.61
CLIP2-206ENST00000487091 HGSO14964 777 aaPredicted RBP18.89■□□□□ 0.61
CLIP2-206ENST00000487091 GRID2O43424 1007 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 SLC25A14O95258 325 aaPredicted RBP18.89■□□□□ 0.61
CLIP2-206ENST00000487091 NDUFA10O95299 355 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 MARCKSL1P49006 195 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 CLCNKAP51800 687 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 LIMK2P53671 638 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 WNT3AP56704 352 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 GPLD1P80108 840 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 VAC14Q08AM6 782 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 XRCC4Q13426 336 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 TRA2AQ13595 282 aaKnown RBP eCLIP18.89■□□□□ 0.61
CLIP2-206ENST00000487091 ZNF569Q5MCW4 686 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 ALS2CLQ60I27 953 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 IYDQ6PHW0 289 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 KDELC1Q6UW63 502 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 ZNF574Q6ZN55 896 aaPredicted RBP18.89■□□□□ 0.61
CLIP2-206ENST00000487091 BBS12Q6ZW61 710 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 JAMLQ86YT9 394 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 CCDC50Q8IVM0 306 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 SLC37A2Q8TED4 501 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 KRT35Q92764 455 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 GLYATL1Q969I3 302 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 FCRL5Q96RD9 977 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 HERPUD2Q9BSE4 406 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 RBSNQ9H1K0 784 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 TRABDQ9H4I3 376 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 UBP1Q9NZI7 540 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 TBC1D29Q9UFV1 150 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 EFR3BQ9Y2G0 817 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 PRKAB1Q9Y478 270 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 ADGRG1Q9Y653 693 aa18.89■□□□□ 0.61
CLIP2-206ENST00000487091 IGHV5-10-1A0A0J9YXX1 117 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 BTNL10A8MVZ5 291 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 IPO7O95373 1038 aaKnown RBP18.88■□□□□ 0.61
CLIP2-206ENST00000487091 EML2O95834 649 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 ACP5P13686 325 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 SLC2A4P14672 509 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 ZNF8P17098 575 aaPredicted RBP18.88■□□□□ 0.61
CLIP2-206ENST00000487091 BPIP17213 487 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 ITIH1P19827 911 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 NFKB1P19838 968 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 RHDQ02161 417 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 COL9A2Q14055 689 aaPredicted RBP18.88■□□□□ 0.61
CLIP2-206ENST00000487091 C16orf72Q14CZ0 275 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.88■□□□□ 0.61
CLIP2-206ENST00000487091 ARHGAP40Q5TG30 622 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 PID1Q7Z2X4 250 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 OR4D9Q8NGE8 314 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 HTR3CQ8WXA8 447 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 QKIQ96PU8 341 aaKnown RBP eCLIP18.88■□□□□ 0.61
CLIP2-206ENST00000487091 PLEKHG4BQ96PX9 1271 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 SARS2Q9NP81 518 aaKnown RBP18.88■□□□□ 0.61
CLIP2-206ENST00000487091 KCNK4Q9NYG8 393 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 KLHL8Q9P2G9 620 aaPredicted RBP18.88■□□□□ 0.61
CLIP2-206ENST00000487091 TRHDEQ9UKU6 1024 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 KCNK6Q9Y257 313 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 PCDHA3Q9Y5H8 950 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 SPO11Q9Y5K1 396 aa18.88■□□□□ 0.61
CLIP2-206ENST00000487091 TRBV23OR9-2A0A075B6M9 112 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 A6NCN8 305 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 RCCD1A6NED2 376 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 SOWAHDA6NJG2 315 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 OR5K4A6NMS3 321 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 APOC4-APOC2K7ER74 178 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 CHUKO15111 745 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 APOC2P02655 101 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 CTNNA1P35221 906 aaKnown RBP18.87■□□□□ 0.61
CLIP2-206ENST00000487091 HMGCLP35914 325 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 ETV5P41161 510 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 TNNT3P45378 269 aaPredicted RBP18.87■□□□□ 0.61
CLIP2-206ENST00000487091 ADGRG6Q86SQ4 1221 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 PHYKPLQ8IUZ5 450 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 ZNF567Q8N184 647 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 SLC39A7Q92504 469 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 SH3KBP1Q96B97 665 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 CCNL2Q96S94 520 aaPredicted RBP18.87■□□□□ 0.61
CLIP2-206ENST00000487091 SLC38A3Q99624 504 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 HEMGNQ9BXL5 484 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 OR2AG1Q9H205 316 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 STN1Q9H668 368 aaKnown RBP18.87■□□□□ 0.61
CLIP2-206ENST00000487091 HACD3Q9P035 362 aa18.87■□□□□ 0.61
CLIP2-206ENST00000487091 KIR2DS5A0A0G2JLQ3 304 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 A0A0G2JNG1 304 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 K7ENP7 123 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 KIR2DS3K7RE56 304 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 ERVH48-1M5A8F1 160 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 AURKAO14965 403 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 VEGFDO43915 354 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 SLC4A1P02730 911 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 F3P13726 295 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms