RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ELP6Q0PNE2 266 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 IFT88Q13099 833 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 NFATC2Q13469 925 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 ELAVL3Q14576 367 aaKnown RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 SETDB1Q15047 1291 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 CHRNA6Q15825 494 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 OCLNQ16625 522 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 TECRLQ5HYJ1 363 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 LIPMQ5VYY2 423 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 PTRHD1Q6GMV3 140 aaKnown RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 CGB2Q6NT52 195 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 ZNF549Q6P9A3 640 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 FOXR1Q6PIV2 292 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 PARM1Q6UWI2 310 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 FAM151BQ6UXP7 276 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 DPPA4Q7L190 304 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 TTC7BQ86TV6 843 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 TSPAN33Q86UF1 283 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 SERPINA9Q86WD7 417 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 SLC22A9Q8IVM8 553 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 WDR75Q8IWA0 830 aaKnown RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 RAVER1Q8IY67 606 aaKnown RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 PIANPQ8IYJ0 282 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 GBP7Q8N8V2 638 aaPredicted RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 GPR26Q8NDV2 337 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 DTX3LQ8TDB6 740 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 MYLIPQ8WY64 445 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 FGF14Q92915 247 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 VOPP1Q96AW1 172 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 EID2BQ96D98 161 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 UBXN10Q96LJ8 280 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 GAS2L1Q99501 681 aaPredicted RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 SIKE1Q9BRV8 207 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 NPHS2Q9NP85 383 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 IL26Q9NPH9 171 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 OXSMQ9NWU1 459 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 GTSE1Q9NYZ3 720 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 MAP10Q9P2G4 905 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 CPSF2Q9P2I0 782 aaKnown RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 EPS15L1Q9UBC2 864 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 XPR1Q9UBH6 696 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 CD207Q9UJ71 328 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 GNPTGQ9UJJ9 305 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 TCF20Q9UGU0 1960 aaKnown RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 PDE4DIPQ5VU43 2346 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 CEP290O15078 2479 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 A0A0U1RQS6 177 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 AGAP14A8MT82 685 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 TARM1B6A8C7 271 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 TK2O00142 265 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 PSMD11O00231 422 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 GAPDHSO14556 408 aaPredicted RBP6.99□□□□□ -1.29
SF3A3-206ENST00000487062 RNASEH1O60930 286 aaKnown RBP6.99□□□□□ -1.29
SF3A3-206ENST00000487062 DNAJC6O75061 913 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 WISP3O95389 354 aaPredicted RBP6.99□□□□□ -1.29
SF3A3-206ENST00000487062 HSPA4LO95757 839 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 EPHX1P07099 455 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 CTSLP07711 333 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 C1SP09871 688 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 HLA-EP13747 358 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 HNRNPLP14866 589 aaKnown RBP eCLIP6.99□□□□□ -1.29
SF3A3-206ENST00000487062 ZNF37AP17032 561 aaPredicted RBP6.99□□□□□ -1.29
SF3A3-206ENST00000487062 TFEBP19484 476 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 CHRM3P20309 590 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 LHCGRP22888 699 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 ITGB7P26010 798 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 ACRV1P26436 265 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 LTBRP36941 435 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 SERPINB5P36952 375 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 NSG1P42857 185 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 HK2P52789 917 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 ARFIP2P53365 341 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 DCDC1P59894 354 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 DNAJB13P59910 316 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 PFKPQ01813 784 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 OCRLQ01968 901 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 CCDC15Q0P6D6 951 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 SF3A3Q12874 501 aaKnown RBP eCLIP6.99□□□□□ -1.29
SF3A3-206ENST00000487062 OVGP1Q12889 678 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 DLG1Q12959 904 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 HTR4Q13639 388 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 COL19A1Q14993 1142 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 CRY1Q16526 586 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 MAP7D1Q3KQU3 841 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 C9orf64Q5T6V5 341 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 FAM46CQ5VWP2 391 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 FBXL19Q6PCT2 694 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 C6orf89Q6UWU4 347 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 ZCCHC23Q6ZST2 131 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 TRPM8Q7Z2W7 1104 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 RAB44Q7Z6P3 723 aaPredicted RBP6.99□□□□□ -1.29
SF3A3-206ENST00000487062 YTHDF3Q7Z739 585 aaKnown RBP6.99□□□□□ -1.29
SF3A3-206ENST00000487062 NRSN1Q8IZ57 195 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 KIRREL3Q8IZU9 778 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 SIX5Q8N196 739 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 NXPE1Q8N323 547 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 ZNF366Q8N895 744 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 SMRP1Q8NCR6 262 aa6.99□□□□□ -1.29
SF3A3-206ENST00000487062 ST13P5Q8NFI4 369 aaPredicted RBP6.99□□□□□ -1.29
SF3A3-206ENST00000487062 RHEBL1Q8TAI7 183 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms