RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 F7P08709 466 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-229ENST00000486665 GSTA2P09210 222 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 C1QTNF9P0C862 333 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 TSHRP16473 764 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 PAMP19021 973 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 MAOBP27338 520 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 FOXN2P32314 431 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 CLDN2P57739 230 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 PRAMEP78395 509 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 FRG1Q14331 258 aaKnown RBP12.69□□□□□ -0.38
HDAC6-229ENST00000486665 SEMA3AQ14563 771 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 IRF4Q15306 451 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 ATP13A5Q4VNC0 1218 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 HSP90AA5PQ58FG0 334 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 ZRANB3Q5FWF4 1079 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 ZDHHC20Q5W0Z9 365 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 PMS2CLQ68D20 193 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 NEPROQ6NW34 567 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 PNCKQ6P2M8 343 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 LDB1Q86U70 411 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-229ENST00000486665 PIANPQ8IYJ0 282 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 TRAM1L1Q8N609 369 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 FBF1Q8TES7 1133 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 FUBP1Q96AE4 644 aaKnown RBP12.69□□□□□ -0.38
HDAC6-229ENST00000486665 BMFQ96LC9 184 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 TTC25Q96NG3 672 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 PCED1AQ9H1Q7 454 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 ASB8Q9H765 288 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 IARS2Q9NSE4 1012 aaKnown RBP12.69□□□□□ -0.38
HDAC6-229ENST00000486665 APPL1Q9UKG1 709 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 WASF3Q9UPY6 502 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 LRRK1Q38SD2 2015 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 CACNA1GO43497 2377 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 PLXND1Q9Y4D7 1925 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 GON4LQ3T8J9 2241 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 A0A1W2PPC4 97 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 TCRBV9S1A1TA0A576 114 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 CCDC151A5D8V7 595 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 CXorf49A8MYA2 514 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-229ENST00000486665 CDX4O14627 284 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-229ENST00000486665 CD3EAPO15446 510 aaKnown RBP12.68□□□□□ -0.38
HDAC6-229ENST00000486665 RHOBTB1O94844 696 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 PRAMEF1O95521 474 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 HNRNPA2B1P22626 353 aaKnown RBP12.68□□□□□ -0.38
HDAC6-229ENST00000486665 IGFALSP35858 605 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 HSD17B3P37058 310 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 PTGER3P43115 390 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 GPR1P46091 355 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 NOVA1P51513 510 aaKnown RBP12.68□□□□□ -0.38
HDAC6-229ENST00000486665 CACNG1Q06432 222 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 INPP5AQ14642 412 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 SETMARQ53H47 684 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-229ENST00000486665 BEND6Q5SZJ8 279 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-229ENST00000486665 TEDDM1Q5T9Z0 273 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 PDPK2PQ6A1A2 396 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 RAET1GQ6H3X3 334 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 AFTPHQ6ULP2 937 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 CYS1Q717R9 158 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 ARMCX6Q7L4S7 300 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 LPCAT2Q7L5N7 544 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 SNX20Q7Z614 316 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 KCNMB4Q86W47 210 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 DTX3LQ8TDB6 740 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 SNX19Q92543 992 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 CERS2Q96G23 380 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 SGSM3Q96HU1 749 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 HSPA12BQ96MM6 686 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 C1QTNF7Q9BXJ2 289 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 CDH19Q9H159 772 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 ARFGAP3Q9NP61 516 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 PPANQ9NQ55 473 aaKnown RBP12.68□□□□□ -0.38
HDAC6-229ENST00000486665 CATSPERZQ9NTU4 200 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 KCTD5Q9NXV2 234 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 SLC17A6Q9P2U8 582 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 RABGEF1Q9UJ41 708 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 SLC30A1Q9Y6M5 507 aa12.68□□□□□ -0.38
HDAC6-229ENST00000486665 SCN8AQ9UQD0 1980 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 CEP192Q8TEP8 1941 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 TRBV5-4A0A0C4DH59 114 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 POM121BA6NF01 834 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 FAM159BA6NKW6 160 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 AGAP14A8MT82 685 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 PRAMEF26H0Y7S4 382 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 INPP4BO15327 924 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 H2AFXP16104 143 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-229ENST00000486665 CD27P26842 260 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 AKT2P31751 481 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 MGAT5Q09328 741 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 CTBP1Q13363 440 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 NFATC2Q13469 925 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 THOC5Q13769 683 aaKnown RBP12.67□□□□□ -0.38
HDAC6-229ENST00000486665 SLC29A2Q14542 456 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 EFTUD2Q15029 972 aaKnown RBP eCLIP12.67□□□□□ -0.387e-7■□□□□ 8.1
HDAC6-229ENST00000486665 MAP9Q49MG5 647 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 FASTKD1Q53R41 847 aaKnown RBP12.67□□□□□ -0.38
HDAC6-229ENST00000486665 ZNF648Q5T619 568 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-229ENST00000486665 ADAMTSL4Q6UY14 1074 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 GCNT7Q6ZNI0 430 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 TAS2R42Q7RTR8 314 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 SERPINA9Q86WD7 417 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms