RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ITM2CQ9NQX7 267 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 ERVK-18Q9QC07 812 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 SHROOM3Q8TF72 1996 aa10.59□□□□□ -0.71
CCDC171-208ENST00000486641 TAF4O00268 1085 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 NDST3O95803 873 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 KRT8P05787 483 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 RBP1P09455 135 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 HGFP14210 728 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 HTR1EP28566 365 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 ADORA2BP29275 332 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 MATKP42679 507 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 CLK3P49761 638 aaKnown RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 DIO3P55073 304 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 EEFSECP57772 596 aaKnown RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 CHRNEQ04844 493 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 SELPLGQ14242 412 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 ZNF181Q2M3W8 571 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 SLC25A52Q3SY17 297 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 COQ5Q5HYK3 327 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 ZNF484Q5JVG2 852 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 OTUD1Q5VV17 481 aaPredicted RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 ZNF470Q6ECI4 717 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 NAPEPLDQ6IQ20 393 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 TXNDC11Q6PKC3 985 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 RALGPS2Q86X27 583 aaPredicted RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 SLC22A9Q8IVM8 553 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 CCDC103Q8IW40 242 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 PEX5LQ8IYB4 626 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 SIX5Q8N196 739 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 C2CD4AQ8NCU7 369 aaPredicted RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 BEST2Q8NFU1 509 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 CNIH3Q8TBE1 160 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 CHAC2Q8WUX2 184 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 TWIST2Q8WVJ9 160 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 RPL3LQ92901 407 aaKnown RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 TUBGCP3Q96CW5 907 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 NSMCE2Q96MF7 247 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 KCNA7Q96RP8 456 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 TUBB1Q9H4B7 451 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 DPEP3Q9H4B8 488 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 INTS7Q9NVH2 962 aaKnown RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 DPP3Q9NY33 737 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 INTS6Q9UL03 887 aaKnown RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 STAP1Q9ULZ2 295 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 SCAF8Q9UPN6 1271 aaKnown RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 EIF3LQ9Y262 564 aaKnown RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 TNFSF13BQ9Y275 285 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 GPSM3Q9Y4H4 160 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 UGT2A1Q9Y4X1 527 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 PCDHGB1Q9Y5G3 927 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 A0A087WZ62 844 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 LOC100130705A0A1B0GUX0 176 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 SYCE1LA8MT33 242 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 ALX3O95076 343 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 HPRP00739 348 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 JCHAINP01591 159 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 LINC00032P0C843 101 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 ENDOUP21128 410 aaKnown RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 GTF2E2P29084 291 aaKnown RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 ZFP36L2P47974 494 aaKnown RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 RBP5P82980 135 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 DGCR6Q14129 220 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 TMEM132DQ14C87 1099 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 ACOX1Q15067 660 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 FSCN1Q16658 493 aaKnown RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 COLEC12Q5KU26 742 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 SIGIRRQ6IA17 410 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 SULT1C3Q6IMI6 304 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 AGMOQ6ZNB7 445 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 SPATC1Q76KD6 591 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 SVOPQ8N4V2 548 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 NPWQ8N729 165 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 ASCC1Q8N9N2 400 aaKnown RBP10.58□□□□□ -0.72
CCDC171-208ENST00000486641 SPATA22Q8NHS9 363 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 MCFD2Q8NI22 146 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 MCOLN3Q8TDD5 553 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 FIG4Q92562 907 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 LGALS12Q96DT0 336 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 TRMOQ9BU70 441 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 ALG9Q9H6U8 611 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 OSGIN1Q9UJX0 560 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 FBXO5Q9UKT4 447 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 TRHDEQ9UKU6 1024 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 NUP205Q92621 2012 aa10.58□□□□□ -0.72
CCDC171-208ENST00000486641 PABPN1LA6NDY0 278 aaKnown RBP10.57□□□□□ -0.72
CCDC171-208ENST00000486641 CDK14O94921 469 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 MFN2O95140 757 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 RAP2AP10114 183 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 LBPP18428 481 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 ARL1P40616 181 aaPredicted RBP10.57□□□□□ -0.72
CCDC171-208ENST00000486641 PPP1R8Q12972 351 aaKnown RBP10.57□□□□□ -0.72
CCDC171-208ENST00000486641 CDK5R2Q13319 367 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 LAPTM5Q13571 262 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 VARS2Q5ST30 1063 aaKnown RBP10.57□□□□□ -0.72
CCDC171-208ENST00000486641 CCBE1Q6UXH8 406 aaPredicted RBP10.57□□□□□ -0.72
CCDC171-208ENST00000486641 FKBP9P1Q75LS8 142 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 CELF2-AS1Q8N7Q2 184 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 IL17RDQ8NFM7 739 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 FAM149B1Q96BN6 582 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms