RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 PELI3Q8N2H9 469 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 RYBPQ8N488 228 aaPredicted RBP9.79□□□□□ -0.84
SND1-213ENST00000486037 CEP112Q8N8E3 955 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 TTC13Q8NBP0 860 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 NETO2Q8NC67 525 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 MYRIPQ8NFW9 859 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 ACTRT1Q8TDG2 376 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 ZDHHC1Q8WTX9 485 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 PTCD2Q8WV60 388 aaKnown RBP9.79□□□□□ -0.84
SND1-213ENST00000486037 NT5C3BQ969T7 300 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 NPY6RQ99463 290 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 HERPUD2Q9BSE4 406 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 SPON2Q9BUD6 331 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 CEP44Q9C0F1 390 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 SUDS3Q9H7L9 328 aaPredicted RBP9.79□□□□□ -0.84
SND1-213ENST00000486037 MAP10Q9P2G4 905 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 ZNF212Q9UDV6 495 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 ENTPD4Q9Y227 616 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 POLHQ9Y253 713 aa9.79□□□□□ -0.84
SND1-213ENST00000486037 NIPBLQ6KC79 2804 aaeCLIP9.78□□□□□ -0.841e-6■■■□□ 15.6
SND1-213ENST00000486037 KRIT1O00522 736 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 CBX6O95503 412 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 KRT1P04264 644 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 AK4P27144 223 aaPredicted RBP9.78□□□□□ -0.84
SND1-213ENST00000486037 HTR1BP28222 390 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 DLSTP36957 453 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 C2orf54Q08AI8 447 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 NME3Q13232 169 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 SEMA5AQ13591 1074 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 NAA30Q147X3 362 aaPredicted RBP9.78□□□□□ -0.84
SND1-213ENST00000486037 SMTNL2Q2TAL5 461 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 SLC25A52Q3SY17 297 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 SNAP47Q5SQN1 464 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 CCDC181Q5TID7 509 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 SP5Q6BEB4 398 aaPredicted RBP9.78□□□□□ -0.84
SND1-213ENST00000486037 JMJD6Q6NYC1 403 aaPredicted RBP9.78□□□□□ -0.84
SND1-213ENST00000486037 STRADAQ7RTN6 431 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 POLNQ7Z5Q5 900 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 SETD3Q86TU7 594 aaPredicted RBP9.78□□□□□ -0.84
SND1-213ENST00000486037 TTC7BQ86TV6 843 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 MNS1Q8NEH6 495 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 OR56A4Q8NGH8 313 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 TEFMQ96QE5 360 aaKnown RBP9.78□□□□□ -0.84
SND1-213ENST00000486037 RUFY1Q96T51 708 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 LGR4Q9BXB1 951 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 C1QTNF7Q9BXJ2 289 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 ZWILCHQ9H900 591 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 RNF14Q9UBS8 474 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 PCSK1NQ9UHG2 260 aa9.78□□□□□ -0.84
SND1-213ENST00000486037 TTC7AQ9ULT0 858 aaPredicted RBP9.78□□□□□ -0.84
SND1-213ENST00000486037 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.78□□□□□ -0.84
SND1-213ENST00000486037 PCSK5Q92824 1860 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 TCRBV7S2A1N4TA0A589 114 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 CTAGE15A4D2H0 777 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 DRGXA6NNA5 263 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 PGRMC1O00264 195 aaKnown RBP9.77□□□□□ -0.85
SND1-213ENST00000486037 KATNA1O75449 491 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 FGGP02679 453 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 FUCA1P04066 466 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 CTAGE8P0CG41 777 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 RARAP10276 462 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 HOXB4P17483 251 aaPredicted RBP9.77□□□□□ -0.85
SND1-213ENST00000486037 ACVRL1P37023 503 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 PAFAH1B1P43034 410 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 ARSEP51690 589 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 LLGL1Q15334 1064 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 TESK1Q15569 626 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 CLPPQ16740 277 aaPredicted RBP9.77□□□□□ -0.85
SND1-213ENST00000486037 HADHQ16836 314 aaKnown RBP9.77□□□□□ -0.85
SND1-213ENST00000486037 TMEM52BQ4KMG9 183 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 SEL1L2Q5TEA6 688 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 SCYL2Q6P3W7 929 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 TMEM71Q6P5X7 295 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 MFSD7Q6UXD7 560 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 CEACAM20Q6UY09 585 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 ARHGAP22Q7Z5H3 698 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 CTAGE6Q86UF2 777 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 SLC13A5Q86YT5 568 aaPredicted RBP9.77□□□□□ -0.85
SND1-213ENST00000486037 APLFQ8IW19 511 aaPredicted RBP9.77□□□□□ -0.85
SND1-213ENST00000486037 CTAGE4Q8IX94 777 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 NAGSQ8N159 534 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 NOA1Q8NC60 698 aaKnown RBP9.77□□□□□ -0.85
SND1-213ENST00000486037 SPATA4Q8NEY3 305 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 EXD1Q8NHP7 514 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 RAPGEF5Q92565 580 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 LURAP1Q96LR2 239 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 TWSG1Q9GZX9 223 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 ATP13A1Q9HD20 1204 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 MLXIPLQ9NP71 852 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 GPATCH2LQ9NWQ4 482 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 DDX56Q9NY93 547 aaKnown RBP9.77□□□□□ -0.85
SND1-213ENST00000486037 TAAR2Q9P1P5 351 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 PDP2Q9P2J9 529 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.77□□□□□ -0.85
SND1-213ENST00000486037 STAP1Q9ULZ2 295 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 V9GYY5 206 aaPredicted RBP9.77□□□□□ -0.85
SND1-213ENST00000486037 POLEQ07864 2286 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 DOCK4Q8N1I0 1966 aa9.77□□□□□ -0.85
SND1-213ENST00000486037 ABCA2Q9BZC7 2435 aa9.76□□□□□ -0.85
SND1-213ENST00000486037 C3orf70A6NLC5 250 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms