RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SYCE1Q8N0S2 351 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 SCARF2Q96GP6 870 aaPredicted RBP17.49■□□□□ 0.39
COL6A1-204ENST00000486023 ZSCAN5AQ9BUG6 496 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 FICDQ9BVA6 458 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 FSD1LQ9BXM9 530 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 RAD18Q9NS91 495 aa17.49■□□□□ 0.39
COL6A1-204ENST00000486023 A0A087WV48 116 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 CCDC187A0A096LP49 1063 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 LOC285095A0A1B0GVY8 99 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 PPM1DO15297 605 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 GRID2O43424 1007 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 STK10O94804 968 aaKnown RBP17.48■□□□□ 0.39
COL6A1-204ENST00000486023 EML2O95834 649 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 AGTP01019 485 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 ZNF8P17098 575 aaPredicted RBP17.48■□□□□ 0.39
COL6A1-204ENST00000486023 B4GALNT1Q00973 533 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 MPP3Q13368 585 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 PRPSAP1Q14558 356 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 SLC1A5Q15758 541 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 SLC14A2Q15849 920 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 ANKRD20A2Q5SQ80 823 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 ANKRD20A1Q5TYW2 823 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 ANKRD20A3Q5VUR7 823 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 ITPRIPL1Q6GPH6 555 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 RAB11FIP2Q7L804 512 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 GLT6D1Q7Z4J2 308 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 JAMLQ86YT9 394 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 FBXO39Q8N4B4 442 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 TRAM1L1Q8N609 369 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 CCDC110Q8TBZ0 833 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 GRAMD1AQ96CP6 724 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 ZNF578Q96N58 590 aaPredicted RBP17.48■□□□□ 0.39
COL6A1-204ENST00000486023 APOL2Q9BQE5 337 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 OSGEPL1Q9H4B0 414 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 THSD1Q9NS62 852 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 VPS18Q9P253 973 aa17.48■□□□□ 0.39
COL6A1-204ENST00000486023 ZFYVE26Q68DK2 2539 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 NBEAQ8NFP9 2946 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 GOLGA6L9A6NEM1 432 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 PNLIPP16233 465 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 MPSTP25325 297 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 PSMB4P28070 264 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 GEMP55040 296 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 PCBP4P57723 403 aaKnown RBP17.47■□□□□ 0.39
COL6A1-204ENST00000486023 OLIG2Q13516 323 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 LRP8Q14114 963 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 PDZD3Q86UT5 571 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 PIM3Q86V86 326 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 GLYATL1Q969I3 302 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 TMEM74Q96NL1 305 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 SRPK1Q96SB4 655 aaKnown RBP17.47■□□□□ 0.39
COL6A1-204ENST00000486023 CARD9Q9H257 536 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 SEMA6CQ9H3T2 930 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 TRIM39Q9HCM9 518 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 KLC4Q9NSK0 619 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 TBC1D29Q9UFV1 150 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 GUCA1BQ9UMX6 200 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 EFR3BQ9Y2G0 817 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 DNAJC16Q9Y2G8 782 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 RP1P56715 2156 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 LRP4O75096 1905 aa17.47■□□□□ 0.39
COL6A1-204ENST00000486023 TMX2-CTNND1H3BSU7 103 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 PLD2O14939 933 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 ZW10O43264 779 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 NUAK1O60285 661 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 UGT1A9O60656 530 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 ANXA9O76027 345 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 JMJD7P0C870 316 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 UGT1A6P19224 532 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 UGT1A1P22309 533 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 UGT1A4P22310 534 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 UGT1A3P35503 534 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 UGT1A5P35504 534 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 NFATC2Q13469 925 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 SPARCL1Q14515 664 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 PTPRCAPQ14761 206 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 ATP13A5Q4VNC0 1218 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 FAM151BQ6UXP7 276 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 TMPRSS9Q7Z410 1059 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 ADGRG6Q86SQ4 1221 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 PHYKPLQ8IUZ5 450 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 TAB3Q8N5C8 712 aaPredicted RBP17.46■□□□□ 0.39
COL6A1-204ENST00000486023 ZNF248Q8NDW4 579 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 SNIP1Q8TAD8 396 aaKnown RBP17.46■□□□□ 0.39
COL6A1-204ENST00000486023 SLC37A2Q8TED4 501 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 SLC46A1Q96NT5 459 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 SLC38A3Q99624 504 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 GBA3Q9H227 469 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 TRABDQ9H4I3 376 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 RMI1Q9H9A7 625 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 UGT1A7Q9HAW7 530 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 UGT1A10Q9HAW8 530 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 UGT1A8Q9HAW9 530 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 PRDM8Q9NQV8 689 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 KCNK4Q9NYG8 393 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 PISDQ9UG56 409 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 PKP3Q9Y446 797 aa17.46■□□□□ 0.39
COL6A1-204ENST00000486023 DDX3YO15523 660 aaKnown RBP17.45■□□□□ 0.38
COL6A1-204ENST00000486023 KLK10O43240 276 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 CDK14O94921 469 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms