RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 TMEM174Q8WUU8 243 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 CPLX3Q8WVH0 158 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 PCSK5Q92824 1860 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 TSACCQ96A04 125 aaPredicted RBP6.63□□□□□ -1.35
SMC4-217ENST00000485867 FAXDC2Q96IV6 333 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 PSMB7Q99436 277 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 SPRY4Q9C004 299 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 UNKQ9C0B0 810 aaKnown RBP6.63□□□□□ -1.35
SMC4-217ENST00000485867 LRRC27Q9C0I9 530 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 INTS2Q9H0H0 1204 aaKnown RBP6.63□□□□□ -1.35
SMC4-217ENST00000485867 SLC39A2Q9NP94 309 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 MBNL1Q9NR56 388 aaKnown RBP6.63□□□□□ -1.35
SMC4-217ENST00000485867 LRIT1Q9P2V4 623 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 VPS51Q9UID3 782 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 TLK1Q9UKI8 766 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 ARHGAP10A1A4S6 786 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 B4E171 279 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 TOR1BO14657 336 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 NUDT21O43809 227 aaKnown RBP6.62□□□□□ -1.35
SMC4-217ENST00000485867 EIF5BO60841 1220 aaKnown RBP6.62□□□□□ -1.35
SMC4-217ENST00000485867 ZNF821O75541 412 aaPredicted RBP6.62□□□□□ -1.35
SMC4-217ENST00000485867 IGLV3-25P01717 112 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 NR3C1P04150 777 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 THBDP07204 575 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 CD19P15391 556 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 TSPAN7P41732 249 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 VAMP7P51809 220 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 ABHD18Q0P651 414 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 TRA2AQ13595 282 aaKnown RBP eCLIP6.62□□□□□ -1.35
SMC4-217ENST00000485867 INPP5JQ15735 1006 aaPredicted RBP6.62□□□□□ -1.35
SMC4-217ENST00000485867 CLPPQ16740 277 aaPredicted RBP6.62□□□□□ -1.35
SMC4-217ENST00000485867 EDRF1Q3B7T1 1238 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 AMZ1Q400G9 498 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 NADK2Q4G0N4 442 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 ANKS6Q68DC2 871 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 KCTD16Q68DU8 428 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 FBXL22Q6P050 247 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 PMF1Q6P1K2 205 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 RD3Q7Z3Z2 195 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 TRIM59Q8IWR1 403 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 ATP6V0D2Q8N8Y2 350 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 CCDC150Q8NCX0 1101 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 ADAMTS17Q8TE56 1095 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 SLC35F5Q8WV83 523 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 SEMA4DQ92854 862 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 RTP4Q96DX8 246 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 EEF2KMTQ96G04 330 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 PDXPQ96GD0 296 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 RPRD1AQ96P16 312 aaPredicted RBP6.62□□□□□ -1.35
SMC4-217ENST00000485867 RBM15Q96T37 977 aaKnown RBP eCLIP6.62□□□□□ -1.35
SMC4-217ENST00000485867 C7orf25Q9BPX7 421 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 SYT3Q9BQG1 590 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 SLC29A3Q9BZD2 475 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 ASPSCR1Q9BZE9 553 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 SLC39A1Q9NY26 324 aa6.62□□□□□ -1.35
SMC4-217ENST00000485867 MRPS18BQ9Y676 258 aaKnown RBP6.62□□□□□ -1.35
SMC4-217ENST00000485867 KCNU1A8MYU2 1149 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 B4DGG1 531 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 NEMP1O14524 444 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 ENDOD1O94919 500 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 FBXO21O94952 628 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 PDCP20941 246 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 CASP1P29466 404 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 PEX5P50542 639 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 LIMK2P53671 638 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 PMS2P54278 862 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 OR1D5P58170 312 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 SRP54P61011 504 aaKnown RBP6.61□□□□□ -1.35
SMC4-217ENST00000485867 PITX1P78337 314 aaPredicted RBP6.61□□□□□ -1.35
SMC4-217ENST00000485867 KRT83P78385 493 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 AMPD3Q01432 767 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 EIF4EBP2Q13542 120 aaPredicted RBP6.61□□□□□ -1.35
SMC4-217ENST00000485867 NR1D2Q14995 579 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 IRF4Q15306 451 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 ZXDCQ2QGD7 858 aaPredicted RBP6.61□□□□□ -1.35
SMC4-217ENST00000485867 DCAF12Q5T6F0 453 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 SYPL2Q5VXT5 272 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 SPECC1LQ69YQ0 1117 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 GTF2IRD2BQ6EKJ0 949 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 LCLAT1Q6UWP7 414 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 ENPP7Q6UWV6 458 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 LINGO4Q6UY18 593 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 ETV3LQ6ZN32 361 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 GTF2IRD2Q86UP8 949 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 NRSN1Q8IZ57 195 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 BMPERQ8N8U9 685 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 DCAF4L2Q8NA75 395 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 FAM46DQ8NEK8 389 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 RAB7BQ96AH8 199 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 FAM149B1Q96BN6 582 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 C5orf34Q96MH7 638 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 HEPHQ9BQS7 1158 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 C1QTNF7Q9BXJ2 289 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 MIS12Q9H081 205 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 KCTD10Q9H3F6 313 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 CUEDC2Q9H467 287 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 MMRN2Q9H8L6 949 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 TMEM8AQ9HCN3 771 aa6.61□□□□□ -1.35
SMC4-217ENST00000485867 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.61□□□□□ -1.35
SMC4-217ENST00000485867 OCIAD1Q9NX40 245 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms