RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 NUAK1O60285 661 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 H2AFZP0C0S5 128 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 KDELR1P24390 212 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 CASP14P31944 242 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 RAB15P59190 212 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 WDR74Q6RFH5 385 aaPredicted RBP19.03■□□□□ 0.64
COL27A1-205ENST00000485397 H2AFVQ71UI9 128 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 SLC9B2Q86UD5 537 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 RTP4Q96DX8 246 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 IQCDQ96DY2 449 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 HERPUD2Q9BSE4 406 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 TBC1D10AQ9BXI6 508 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 STN1Q9H668 368 aaKnown RBP19.03■□□□□ 0.64
COL27A1-205ENST00000485397 RMI1Q9H9A7 625 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 PRDM8Q9NQV8 689 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 IFNKQ9P0W0 207 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 ATXN10Q9UBB4 475 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 KLHL3Q9UH77 587 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 IL17BQ9UHF5 180 aa19.03■□□□□ 0.64
COL27A1-205ENST00000485397 RGSL1A5PLK6 1076 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 TERTO14746 1132 aaKnown RBP19.02■□□□□ 0.64
COL27A1-205ENST00000485397 PPFIA2O75334 1257 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 PIRTP0C851 137 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 F3P13726 295 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 ZNF8P17098 575 aaPredicted RBP19.02■□□□□ 0.64
COL27A1-205ENST00000485397 CSRP3P50461 194 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 IFI35P80217 286 aaPredicted RBP19.02■□□□□ 0.64
COL27A1-205ENST00000485397 MC2RQ01718 297 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 PPIDQ08752 370 aaKnown RBP19.02■□□□□ 0.64
COL27A1-205ENST00000485397 ALS2CLQ60I27 953 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 ATG14Q6ZNE5 492 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 KDELC2Q7Z4H8 507 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 PLD5Q8N7P1 536 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 CTNNBL1Q8WYA6 563 aaPredicted RBP19.02■□□□□ 0.64
COL27A1-205ENST00000485397 SH3KBP1Q96B97 665 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 ZNF830Q96NB3 372 aaPredicted RBP19.02■□□□□ 0.64
COL27A1-205ENST00000485397 CEP41Q9BYV8 373 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 SPRY4Q9C004 299 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 BRD8Q9H0E9 1235 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 SLC25A18Q9H1K4 315 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 OR2AG1Q9H205 316 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 CARD9Q9H257 536 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 APMAPQ9HDC9 416 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 PILRAQ9UKJ1 303 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 SHOC2Q9UQ13 582 aa19.02■□□□□ 0.64
COL27A1-205ENST00000485397 SPTA1P02549 2419 aa19.02■□□□□ 0.63
COL27A1-205ENST00000485397 MESDQ14696 234 aa19.01■□□□□ 0.63
COL27A1-205ENST00000485397 BORAQ6PGQ7 559 aa19.01■□□□□ 0.63
COL27A1-205ENST00000485397 TIPARPQ7Z3E1 657 aaKnown RBP19.01■□□□□ 0.63
COL27A1-205ENST00000485397 GPR26Q8NDV2 337 aa19.01■□□□□ 0.63
COL27A1-205ENST00000485397 TEFMQ96QE5 360 aaKnown RBP19.01■□□□□ 0.63
COL27A1-205ENST00000485397 TRIB3Q96RU7 358 aa19.01■□□□□ 0.63
COL27A1-205ENST00000485397 SPATA16Q9BXB7 569 aa19.01■□□□□ 0.63
COL27A1-205ENST00000485397 ADGRE3Q9BY15 652 aa19.01■□□□□ 0.63
COL27A1-205ENST00000485397 ZFYVE1Q9HBF4 777 aa19.01■□□□□ 0.63
COL27A1-205ENST00000485397 KLC4Q9NSK0 619 aa19.01■□□□□ 0.63
COL27A1-205ENST00000485397 CPNE7Q9UBL6 633 aa19.01■□□□□ 0.63
COL27A1-205ENST00000485397 HEY1Q9Y5J3 304 aa19.01■□□□□ 0.63
COL27A1-205ENST00000485397 ADGRG1Q9Y653 693 aa19.01■□□□□ 0.63
COL27A1-205ENST00000485397 KIR2DS5A0A0G2JLQ3 304 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 A0A0G2JNG1 304 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 LOC101059948A0A1B0GTJ6 334 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 LRRD1A4D1F6 860 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 CYSRT1A8MQ03 144 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 GOLGA6L19H0YKK7 550 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 KIR2DS3K7RE56 304 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 NKX2-8O15522 239 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 SLC4A1P02730 911 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 SLC2A4P14672 509 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 HNRNPH3P31942 346 aaKnown RBP19■□□□□ 0.63
COL27A1-205ENST00000485397 MAN1A1P33908 653 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 EPHA4P54764 986 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 AP1B1Q10567 949 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 KIR2DS5Q14953 304 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 SLC18A3Q16572 532 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 ADGRG6Q86SQ4 1221 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 UNC5BQ8IZJ1 945 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 NLGN4XQ8N0W4 816 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 NLGN4YQ8NFZ3 816 aaPredicted RBP19■□□□□ 0.63
COL27A1-205ENST00000485397 PLEKHG4BQ96PX9 1271 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 LDHAL6BQ9BYZ2 381 aaPredicted RBP19■□□□□ 0.63
COL27A1-205ENST00000485397 FBXO8Q9NRD0 319 aa19■□□□□ 0.63
COL27A1-205ENST00000485397 SCHIP1Q9P0W5 487 aaPredicted RBP19■□□□□ 0.63
COL27A1-205ENST00000485397 TLN1Q9Y490 2541 aaKnown RBP19■□□□□ 0.63
COL27A1-205ENST00000485397 OR5K4A6NMS3 321 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 ZNF891A8MT65 544 aaPredicted RBP18.99■□□□□ 0.63
COL27A1-205ENST00000485397 SLC25A14O95258 325 aaPredicted RBP18.99■□□□□ 0.63
COL27A1-205ENST00000485397 CLCNKAP51800 687 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 POLE2P56282 527 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 UBE2IP63279 158 aaKnown RBP18.99■□□□□ 0.63
COL27A1-205ENST00000485397 ASTE1Q2TB18 679 aaPredicted RBP18.99■□□□□ 0.63
COL27A1-205ENST00000485397 PLA2G4EQ3MJ16 856 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 ZNF569Q5MCW4 686 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 CRTC3Q6UUV7 619 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 NPNTQ6UXI9 565 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 CEACAM20Q6UY09 585 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 B4GALNT4Q76KP1 1039 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 TMC3Q7Z5M5 1100 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 PTRH1Q86Y79 214 aaKnown RBP18.99■□□□□ 0.63
COL27A1-205ENST00000485397 PHYKPLQ8IUZ5 450 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms