RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 GPC1P35052 558 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 GARSP41250 739 aaKnown RBP6.33□□□□□ -1.4
CAPN13-206ENST00000485248 GPR3P46089 330 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 CARSP49589 748 aaKnown RBP6.33□□□□□ -1.4
CAPN13-206ENST00000485248 CCNG1P51959 295 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 ZNF131P52739 623 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 DRG2P55039 364 aaKnown RBP6.33□□□□□ -1.4
CAPN13-206ENST00000485248 RRADP55042 308 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 CASP6P55212 293 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 MYL6P60660 151 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 SRP54P61011 504 aaKnown RBP6.33□□□□□ -1.4
CAPN13-206ENST00000485248 RPS24P62847 133 aaKnown RBP6.33□□□□□ -1.4
CAPN13-206ENST00000485248 IRX1P78414 480 aaPredicted RBP6.33□□□□□ -1.4
CAPN13-206ENST00000485248 PPP2R2BQ00005 443 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 B4GALNT1Q00973 533 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 FOXD4Q12950 439 aaPredicted RBP6.33□□□□□ -1.4
CAPN13-206ENST00000485248 DNASE1L3Q13609 305 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 ALCAMQ13740 583 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 HLTFQ14527 1009 aaKnown RBP eCLIP6.33□□□□□ -1.4
CAPN13-206ENST00000485248 ITIH4Q14624 930 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 ANKRD20A8PQ5CZ79 823 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 FSCBQ5H9T9 825 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 TPRG1LQ5T0D9 272 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 ANKRD40Q6AI12 368 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 SCARA3Q6AZY7 606 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 TMEM71Q6P5X7 295 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 LINGO4Q6UY18 593 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 PARS2Q7L3T8 475 aaKnown RBP6.33□□□□□ -1.4
CAPN13-206ENST00000485248 UNC93AQ86WB7 457 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 NAGSQ8N159 534 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 CFAP52Q8N1V2 620 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 RASGEF1CQ8N431 466 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 RBMXL3Q8N7X1 1067 aaKnown RBP6.33□□□□□ -1.4
CAPN13-206ENST00000485248 GPATCH11Q8N954 259 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 C12orf29Q8N999 325 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 ATP11CQ8NB49 1132 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 OR10G6Q8NH81 332 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 CFAP61Q8NHU2 1237 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 CXorf40AQ8TE69 158 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 ITLN2Q8WWU7 325 aaPredicted RBP6.33□□□□□ -1.4
CAPN13-206ENST00000485248 TAF4BQ92750 862 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 NINJ1Q92982 152 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 TLCD1Q96CP7 247 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 FOXC2Q99958 501 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 TMEM109Q9BVC6 243 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 TXLNGYQ9BZA5 131 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 LRRC27Q9C0I9 530 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 NDST4Q9H3R1 872 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 ST6GALNAC4Q9H4F1 302 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 ZFAND3Q9H8U3 227 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 MLXIPLQ9NP71 852 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 FBXO8Q9NRD0 319 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 AIPL1Q9NZN9 384 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 C5AR2Q9P296 337 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 STK17AQ9UEE5 414 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 LNPEPQ9UIQ6 1025 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 MOSPD1Q9UJG1 213 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 VPS28Q9UK41 221 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 INTUQ9ULD6 942 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 PPT2Q9UMR5 302 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 WASF2Q9Y6W5 498 aa6.33□□□□□ -1.4
CAPN13-206ENST00000485248 A0A0A6YYK5 440 aaPredicted RBP6.32□□□□□ -1.4
CAPN13-206ENST00000485248 TRGV8A0A0C4DH27 118 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 MACROD2A1Z1Q3 448 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 TRIM49BA6NDI0 452 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 GOLGA6L10A6NI86 522 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 RASA4BC9J798 803 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 HHLA1C9JL84 531 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 RASA4O43374 803 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 B4GAT1O43505 415 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 AKR1B10O60218 316 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 TM7SF2O76062 418 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 GFPT2O94808 682 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 GNA14O95837 355 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 ZBED1O96006 694 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 MOCS2O96007 188 aaPredicted RBP6.32□□□□□ -1.4
CAPN13-206ENST00000485248 CST3P01034 146 aaPredicted RBP6.32□□□□□ -1.4
CAPN13-206ENST00000485248 KRT14P02533 472 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 NUDT17P0C025 328 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 FAM153BP0C7A2 387 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 MYZAPP0CAP1 466 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 F8A1P23610 371 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 ECHS1P30084 290 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 UBA7P41226 1012 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 PEX5P50542 639 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 SMSP52788 366 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 TBX4P57082 545 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 GPLD1P80108 840 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 PDE1BQ01064 536 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 FOLH1Q04609 750 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 SQSTM1Q13501 440 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 ZKSCAN8Q15776 578 aaPredicted RBP6.32□□□□□ -1.4
CAPN13-206ENST00000485248 SLC18A3Q16572 532 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 IFI16Q16666 785 aaKnown RBP6.32□□□□□ -1.4
CAPN13-206ENST00000485248 UGT8Q16880 541 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 ALG11Q2TAA5 492 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 PLEKHN1Q494U1 663 aaPredicted RBP6.32□□□□□ -1.4
CAPN13-206ENST00000485248 FAM153CQ494X1 144 aa6.32□□□□□ -1.4
CAPN13-206ENST00000485248 TTC39BQ5VTQ0 682 aaPredicted RBP6.32□□□□□ -1.4
CAPN13-206ENST00000485248 NKAIN2Q5VXU1 208 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms