RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 HAUS8Q9BT25 410 aa6.63□□□□□ -1.35
UBR3-210ENST00000484596 OR10A4Q9H209 315 aa6.63□□□□□ -1.35
UBR3-210ENST00000484596 ALDH8A1Q9H2A2 487 aaPredicted RBP6.63□□□□□ -1.35
UBR3-210ENST00000484596 GIMAP4Q9NUV9 329 aa6.63□□□□□ -1.35
UBR3-210ENST00000484596 CKAP5Q14008 2032 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 NUP160Q12769 1436 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 CNTNAP2Q9UHC6 1331 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 CPED1A4D0V7 1026 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 GOLGA6L9A6NEM1 432 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 CDRT15L2A8MXV6 281 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 UBE2CO00762 179 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 VCYO14598 125 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 CSPG5O95196 566 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 HIST1H2ABP04908 130 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 G6PDP11413 515 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 HIST1H2ADP20671 130 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 UBA1P22314 1058 aaKnown RBP6.62□□□□□ -1.35
UBR3-210ENST00000484596 EIF2S3P41091 472 aaKnown RBP6.62□□□□□ -1.35
UBR3-210ENST00000484596 NRIP1P48552 1158 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 PEX5P50542 639 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 HSD17B4P51659 736 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 ACSM2AQ08AH3 577 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 EFNB3Q15768 340 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 CDONQ4KMG0 1287 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 ACSM2BQ68CK6 577 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 KIAA0930Q6ICG6 404 aaPredicted RBP6.62□□□□□ -1.35
UBR3-210ENST00000484596 FAM122CQ6P4D5 195 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 HIST3H2AQ7L7L0 130 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 VSIG1Q86XK7 387 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 CLIP4Q8N3C7 705 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 ZKSCAN4Q969J2 545 aaPredicted RBP6.62□□□□□ -1.35
UBR3-210ENST00000484596 SLC22A18Q96BI1 424 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 APOL6Q9BWW8 343 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 C1QTNF1Q9BXJ1 281 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 CPSF2Q9P2I0 782 aaKnown RBP6.62□□□□□ -1.35
UBR3-210ENST00000484596 FBXL17Q9UF56 701 aa6.62□□□□□ -1.35
UBR3-210ENST00000484596 hDV102S1A0JD36 115 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 GPC4O75487 556 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 SRPRAP08240 638 aaKnown RBP6.61□□□□□ -1.35
UBR3-210ENST00000484596 SELLP14151 372 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 SLC15A1P46059 708 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 LMAN1P49257 510 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 RRP1P56182 461 aaKnown RBP6.61□□□□□ -1.35
UBR3-210ENST00000484596 AIMP1Q12904 312 aaKnown RBP6.61□□□□□ -1.35
UBR3-210ENST00000484596 CTF1Q16619 201 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 ASTE1Q2TB18 679 aaPredicted RBP6.61□□□□□ -1.35
UBR3-210ENST00000484596 EIF2S3LQ2VIR3 472 aaKnown RBP6.61□□□□□ -1.35
UBR3-210ENST00000484596 HIST2H2BCQ6DN03 193 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 HIST2H2BDQ6DRA6 164 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 LINC00346Q8IVM7 164 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 NEXN-AS1Q8NBZ9 246 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 THOC3Q96J01 351 aaKnown RBP6.61□□□□□ -1.35
UBR3-210ENST00000484596 PPP1R13BQ96KQ4 1090 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 RABEP2Q9H5N1 569 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 MAGIXQ9H6Y5 334 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 MMP25Q9NPA2 562 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 SLC35C2Q9NQQ7 365 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 WWOXQ9NZC7 414 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 FBXW11Q9UKB1 542 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 NENFQ9UMX5 172 aa6.61□□□□□ -1.35
UBR3-210ENST00000484596 FAM170AA1A519 330 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 LINC01553A4QN01 128 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 CLEC18AA5D8T8 446 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 PLRG1O43660 514 aaKnown RBP6.6□□□□□ -1.35
UBR3-210ENST00000484596 NDUFS7O75251 213 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 IGHV4-30-4P0DP06 118 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 SRCP12931 536 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 FASLGP48023 281 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 CLCN3P51790 818 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 MFAP4P55083 255 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 TAS2R40P59535 323 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 CSNK2A1P68400 391 aaPredicted RBP6.6□□□□□ -1.35
UBR3-210ENST00000484596 TNFAIP1Q13829 316 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 PCLAFQ15004 111 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 ATP13A5Q4VNC0 1218 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 XKR9Q5GH70 373 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 FAM69BQ5VUD6 431 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 FRG2Q64ET8 278 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 PMS2CLQ68D20 193 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 SLC36A4Q6YBV0 504 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 ADGRA1Q86SQ6 560 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 DNAAF5Q86Y56 855 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 EPHX4Q8IUS5 362 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 GPATCH11Q8N954 259 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 AVL9Q8NBF6 648 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 CLEC18CQ8NCF0 446 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 CSNK2A3Q8NEV1 391 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 PRPF31Q8WWY3 499 aaKnown RBP6.6□□□□□ -1.35
UBR3-210ENST00000484596 OR1F2PQ96R84 312 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 KCNN2Q9H2S1 579 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 ACSS1Q9NUB1 689 aaPredicted RBP6.6□□□□□ -1.35
UBR3-210ENST00000484596 TAB2Q9NYJ8 693 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 OGFRQ9NZT2 677 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 MARCH4Q9P2E8 410 aaPredicted RBP6.6□□□□□ -1.35
UBR3-210ENST00000484596 COPG2Q9UBF2 871 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 SLC9A2Q9UBY0 812 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 OR14J1Q9UGF5 321 aa6.6□□□□□ -1.35
UBR3-210ENST00000484596 R3HDM2Q9Y2K5 976 aaKnown RBP6.6□□□□□ -1.35
UBR3-210ENST00000484596 IGLV5-52A0A0A0MRZ9 124 aa6.59□□□□□ -1.35
UBR3-210ENST00000484596 KANSL1LA0AUZ9 987 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms