RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 DENND1AQ8TEH3 1009 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SREK1Q8WXA9 508 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 OR8D1Q8WZ84 308 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SEC16BQ96JE7 1060 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SERAC1Q96JX3 654 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 TSNARE1Q96NA8 513 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 KLF6Q99612 283 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 C2orf49Q9BVC5 232 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 CAPN10Q9HC96 672 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 CHRAC1Q9NRG0 131 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 MKS1Q9NXB0 559 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 DCDC2Q9UHG0 476 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 HS3ST2Q9Y278 367 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 TCAF1Q9Y4C2 921 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PCDHB3Q9Y5E6 796 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 WASF2Q9Y6W5 498 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 ZCWPW2A0A1B0GU75 182 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 H0Y8X5 98 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 RNASEH1O60930 286 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 TMCC1O94876 653 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PIGNO95427 931 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PEX11BO96011 259 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 EPOP01588 193 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 MPOP05164 745 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 FGF1P05230 155 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 ITGA2BP08514 1039 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SPINK2P20155 84 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 TYK2P29597 1187 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 CRHR1P34998 444 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 ADRA1AP35348 466 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 NNMTP40261 264 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 CCNFP41002 786 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SERPINB8P50452 374 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 NEK3P51956 506 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 WDR4P57081 412 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 MAXP61244 160 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SULT2A1Q06520 285 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 OLIG2Q13516 323 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PUM1Q14671 1186 aaKnown RBP eCLIP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 POU6F1Q14863 301 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SLC1A5Q15758 541 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SLC14A2Q15849 920 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 HSP90AA5PQ58FG0 334 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PIP5KL1Q5T9C9 394 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SEL1L3Q68CR1 1132 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 KIAA0895LQ68EN5 471 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PSAPL1Q6NUJ1 521 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SLC23A3Q6PIS1 610 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 KDELC1Q6UW63 502 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 RANBP10Q6VN20 620 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 KYAT3Q6YP21 454 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 RGS9BPQ6ZS82 235 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 CCDC121Q6ZUS5 278 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PARS2Q7L3T8 475 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 CCDC91Q7Z6B0 441 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 RETREG3Q86VR2 466 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SLC25A41Q8N5S1 370 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 OTUD6BQ8N6M0 293 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 CCDC63Q8NA47 563 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 DEFB124Q8NES8 71 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 C1orf216Q8TAB5 229 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 MFSD3Q96ES6 412 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 MRGPRX2Q96LB1 330 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 NSMCE3Q96MG7 304 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 RANBP9Q96S59 729 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SRPK1Q96SB4 655 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 RBBP8Q99708 897 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SEMA3CQ99985 751 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 ELAC2Q9BQ52 826 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 TRIM56Q9BRZ2 755 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 FAM167BQ9BTA0 163 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 NUSAP1Q9BXS6 441 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 ACE2Q9BYF1 805 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SLC13A1Q9BZW2 595 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PLAC1Q9HBJ0 212 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 ARNT2Q9HBZ2 717 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 TM9SF3Q9HD45 589 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 TMEM9BQ9NQ34 198 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 IARS2Q9NSE4 1012 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PCMTD2Q9NV79 361 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 FGFR1OP2Q9NVK5 253 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 KLHL14Q9P2G3 628 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 GRID1Q9ULK0 1009 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PPM1HQ9ULR3 514 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 FNDC3AQ9Y2H6 1198 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 TRPM6Q9BX84 2022 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TBC1D3DA0A087WVF3 549 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TBC1D3IA0A087WXS9 549 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TBC1D3EA0A087X179 549 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TBC1D3KA0A087X1G2 549 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 LOC100996750A0A140TA64 210 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 SPAARA0A1B0GVQ0 90 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 WDR91A4D1P6 747 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TBC1D3FA6NER0 549 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 PRR5-ARHGAP8B1AHC4 643 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TBC1D3LB9A6J9 549 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TM4SF5O14894 197 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 MUSKO15146 869 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 BCAT2O15382 392 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 SPINT1O43278 529 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms