RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 TFF2Q03403 129 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 KDSRQ06136 332 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 FAM91A1Q658Y4 838 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 LRRC66Q68CR7 880 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 NAIF1Q69YI7 327 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 ELMSAN1Q6PJG2 1045 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 PIWIL4Q7Z3Z4 852 aaKnown RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 NPAS3Q8IXF0 933 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 GPR26Q8NDV2 337 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 CD200R1Q8TD46 325 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 EEF1AKMT1Q8WVE0 214 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 FGF13Q92913 245 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 SCRN2Q96FV2 425 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 FAM210AQ96ND0 272 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 ABCG8Q9H221 673 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 EBF3Q9H4W6 596 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 GSTO2Q9H4Y5 243 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 MARK1Q9P0L2 795 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 CORO1CQ9ULV4 474 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 RPL26L1Q9UNX3 145 aaKnown RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 PRSS21Q9Y6M0 314 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 TTC28Q96AY4 2481 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 CCDC189A1A4V9 331 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 SOBPA7XYQ1 873 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 ZNF197O14709 1029 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 HDAC3O15379 428 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 ATP5HO75947 161 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CTSLP07711 333 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CHRM3P20309 590 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 PTPN4P29074 926 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 MAPK8P45983 427 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CLCN7P51798 805 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CACNG1Q06432 222 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 SULT2A1Q06520 285 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 PRKAA1Q13131 559 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 TSNQ15631 228 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CHRNA6Q15825 494 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 PDCD2Q16342 344 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 DUSP6Q16828 381 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 PFKFB4Q16877 469 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 POM121L1PQ3SYA9 428 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 SH2D4BQ5SQS7 431 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 ZNF678Q5SXM1 525 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 TMEM198Q66K66 360 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 METTL3Q86U44 580 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 SERPINA9Q86WD7 417 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CELF5Q8N6W0 485 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 SREK1Q8WXA9 508 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 INPP5DQ92835 1189 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 FUBP1Q96AE4 644 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 NSUN5Q96P11 429 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 LYSMD1Q96S90 227 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CADM1Q9BY67 442 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 ASB8Q9H765 288 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 BRD9Q9H8M2 597 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 POPDC3Q9HBV1 291 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 DUS2Q9NX74 493 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 KLHL42Q9P2K6 505 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 MBD1Q9UIS9 605 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 FBXO10Q9UK96 956 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 ERVW-1Q9UQF0 538 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 SLC30A1Q9Y6M5 507 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 ATG2AQ2TAZ0 1938 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 ANKRD12Q6UB98 2062 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 DCXO43602 365 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 NPHS1O60500 1241 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CCDC22O60826 627 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 POP4O95707 220 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 ESRRAP11474 423 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 TCF3P15923 654 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 IMPDH1P20839 514 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CALB2P22676 271 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 PTGER3P43115 390 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 SLC6A11P48066 632 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 KPNA2P52292 529 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 ADARP55265 1226 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 GAB4Q2WGN9 574 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 LSM12Q3MHD2 195 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 UNC50Q53HI1 259 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CFAP157Q5JU67 520 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 SEL1L3Q68CR1 1132 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CYHR1Q6ZMK1 362 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 FRMD7Q6ZUT3 714 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CPNE9Q8IYJ1 553 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 PCDH20Q8N6Y1 951 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 POU5F2Q8N7G0 328 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 LKAAEAR1Q8TD35 194 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 OSCP1Q8WVF1 389 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 KCNJ9Q92806 393 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 NXPE3Q969Y0 559 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 KIAA1191Q96A73 305 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CNDP1Q96KN2 507 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 KLHL32Q96NJ5 620 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 ASB16Q96NS5 453 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 MCCC1Q96RQ3 725 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CPEB1Q9BZB8 566 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CIPCQ9C0C6 399 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CEP44Q9C0F1 390 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 LMAN2LQ9H0V9 348 aa8.77□□□□□ -1.01
CDC42SE1-204ENST00000483763 CCDC68Q9H2F9 335 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms