RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 TRNAU1APQ9NX07 287 aaKnown RBP13.27□□□□□ -0.29
SSR1-208ENST00000483409 VPS18Q9P253 973 aa13.27□□□□□ -0.29
SSR1-208ENST00000483409 ATXN10Q9UBB4 475 aa13.27□□□□□ -0.29
SSR1-208ENST00000483409 ZNHIT2Q9UHR6 403 aa13.27□□□□□ -0.29
SSR1-208ENST00000483409 FKBPLQ9UIM3 349 aa13.27□□□□□ -0.29
SSR1-208ENST00000483409 TMPRSS11EQ9UL52 423 aa13.27□□□□□ -0.29
SSR1-208ENST00000483409 TTC7AQ9ULT0 858 aaPredicted RBP13.27□□□□□ -0.29
SSR1-208ENST00000483409 ST14Q9Y5Y6 855 aa13.27□□□□□ -0.29
SSR1-208ENST00000483409 KNTC1P50748 2209 aa13.27□□□□□ -0.29
SSR1-208ENST00000483409 ERI2A8K979 691 aaKnown RBP13.26□□□□□ -0.29
SSR1-208ENST00000483409 CCL22O00626 93 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 GAPDHSO14556 408 aaPredicted RBP13.26□□□□□ -0.29
SSR1-208ENST00000483409 UGT1A9O60656 530 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 APRTP07741 180 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 ZNF8P17098 575 aaPredicted RBP13.26□□□□□ -0.29
SSR1-208ENST00000483409 UGT1A6P19224 532 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 UGT1A1P22309 533 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 UGT1A4P22310 534 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 CA5AP35218 305 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 UGT1A3P35503 534 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 UGT1A5P35504 534 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 GRIA1P42261 906 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 RPIAP49247 311 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 VPS41P49754 854 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 ZNF140P52738 457 aaPredicted RBP13.26□□□□□ -0.29
SSR1-208ENST00000483409 TERF1P54274 439 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 BASP1P80723 227 aaKnown RBP13.26□□□□□ -0.29
SSR1-208ENST00000483409 SHC2P98077 582 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 CTBSQ01459 385 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 ILKQ13418 452 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 TRIP13Q15645 432 aaPredicted RBP13.26□□□□□ -0.29
SSR1-208ENST00000483409 KHDC1Q4VXA5 237 aaKnown RBP13.26□□□□□ -0.29
SSR1-208ENST00000483409 TTC27Q6P3X3 843 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 CRTC3Q6UUV7 619 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 PPP1R21Q6ZMI0 780 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 EFL1Q7Z2Z2 1120 aaKnown RBP13.26□□□□□ -0.29
SSR1-208ENST00000483409 ADGRG6Q86SQ4 1221 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 LINC00523Q86TU6 105 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 MARCH9Q86YJ5 346 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 DNAAF3Q8N9W5 541 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 UNC13CQ8NB66 2214 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 GDAP1Q8TB36 358 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 ACTRT1Q8TDG2 376 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 VPS35Q96QK1 796 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 DPEP2Q9H4A9 486 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 UGT1A7Q9HAW7 530 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 UGT1A10Q9HAW8 530 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 UGT1A8Q9HAW9 530 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 TRIM39Q9HCM9 518 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 SPATS2LQ9NUQ6 558 aaKnown RBP13.26□□□□□ -0.29
SSR1-208ENST00000483409 NCKIPSDQ9NZQ3 722 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 TAAR2Q9P1P5 351 aa13.26□□□□□ -0.29
SSR1-208ENST00000483409 PIKFYVEQ9Y2I7 2098 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 COL27A1Q8IZC6 1860 aaPredicted RBP13.25□□□□□ -0.29
SSR1-208ENST00000483409 CCDC78A2IDD5 438 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 EME2A4GXA9 379 aaPredicted RBP13.25□□□□□ -0.29
SSR1-208ENST00000483409 FAM149AA5PLN7 773 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 CES2O00748 559 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 LDB2O43679 373 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 NUAK1O60285 661 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 SUN1O94901 812 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 PRAMEF1O95521 474 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 ACP5P13686 325 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 COILP38432 576 aaPredicted RBP13.25□□□□□ -0.29
SSR1-208ENST00000483409 ACTR1BP42025 376 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 ACTR1AP61163 376 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 PDE1BQ01064 536 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 ITGA9Q13797 1035 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 PLA2G4EQ3MJ16 856 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 PERM1Q5SV97 790 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 HES3Q5TGS1 186 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 MICALCLQ6ZW33 695 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 CHST15Q7LFX5 561 aaPredicted RBP13.25□□□□□ -0.29
SSR1-208ENST00000483409 DNAJC1Q96KC8 554 aaKnown RBP13.25□□□□□ -0.29
SSR1-208ENST00000483409 CAPZA3Q96KX2 299 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 NAPGQ99747 312 aaPredicted RBP13.25□□□□□ -0.29
SSR1-208ENST00000483409 PADI4Q9UM07 663 aa13.25□□□□□ -0.29
SSR1-208ENST00000483409 GOLGA6L10A0A0M3HER8 536 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 GRID2O43424 1007 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 NOBOXO60393 691 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 PHF2O75151 1096 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 SRP72O76094 671 aaKnown RBP13.24□□□□□ -0.29
SSR1-208ENST00000483409 GAS8O95995 478 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 TCP1P17987 556 aaKnown RBP13.24□□□□□ -0.29
SSR1-208ENST00000483409 INSM1Q01101 510 aaPredicted RBP13.24□□□□□ -0.29
SSR1-208ENST00000483409 CDH17Q12864 832 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 LRP8Q14114 963 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 SMAD1Q15797 465 aaKnown RBP13.24□□□□□ -0.29
SSR1-208ENST00000483409 CYP1B1Q16678 543 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 CCDC38Q502W7 563 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 CERCAMQ5T4B2 595 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 GPRC6AQ5T6X5 926 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 CCDC137Q6PK04 289 aaKnown RBP13.24□□□□□ -0.29
SSR1-208ENST00000483409 C4orf22Q6V702 233 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 TMPRSS7Q7RTY8 843 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 GPR156Q8NFN8 814 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 MAPK15Q8TD08 544 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 ZNF398Q8TD17 642 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 ZDHHC1Q8WTX9 485 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 PATE1Q8WXA2 126 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms