RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 SARM1Q6SZW1 724 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 CYP20A1Q6UW02 462 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 KRBA2Q6ZNG9 492 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 TAGAPQ8N103 731 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 NEK9Q8TD19 979 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 CREB3L4Q8TEY5 395 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 ARHGEF2Q92974 986 aaKnown RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 INTS12Q96CB8 462 aaKnown RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 NSUN4Q96CB9 384 aaKnown RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 ERP27Q96DN0 273 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 CALML4Q96GE6 196 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 ADGRG7Q96K78 797 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 SLITRK1Q96PX8 696 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 MAK16Q9BXY0 300 aaKnown RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 ZNF556Q9HAH1 456 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 TMEM51Q9NW97 253 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 ADD3Q9UEY8 706 aaKnown RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 NRBP1Q9UHY1 535 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 ZNF215Q9UL58 517 aaPredicted RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 CORO1CQ9ULV4 474 aaPredicted RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 A4GNTQ9UNA3 340 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 TOGARAM1Q9Y4F4 1720 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 FAM237BA0A1B0GVD1 139 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.78□□□□□ -1.8
GTF3A-207ENST00000482655 BCAT2O15382 392 aaPredicted RBP3.78□□□□□ -1.8
GTF3A-207ENST00000482655 CH25HO95992 272 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 EIF2S1P05198 315 aaKnown RBP3.78□□□□□ -1.8
GTF3A-207ENST00000482655 PTPN2P17706 415 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 MYF6P23409 242 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 GNAQP50148 359 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 PRELPP51888 382 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 SNX16P57768 344 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 BNC1Q01954 994 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 CREB5Q02930 508 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 FAM27E3Q08E93 113 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 ST3GAL1Q11201 340 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 CAPSQ13938 189 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 MED22Q15528 200 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 ZNF718Q3SXZ3 478 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 TMCO3Q6UWJ1 677 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 MOB3CQ70IA8 216 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 DENND6AQ8IWF6 608 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 OR8H2Q8N162 312 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 SRBD1Q8N5C6 995 aaKnown RBP3.78□□□□□ -1.8
GTF3A-207ENST00000482655 OR4N2Q8NGD1 307 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 GPT2Q8TD30 523 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 TMEM170AQ8WVE7 144 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 JAKMIP2Q96AA8 810 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 OTULINQ96BN8 352 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 RNF183Q96D59 192 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 FAM120BQ96EK7 910 aaKnown RBP3.78□□□□□ -1.8
GTF3A-207ENST00000482655 FEM1CQ96JP0 617 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 MAP7D2Q96T17 732 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 NCAPGQ9BPX3 1015 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 LBHD1Q9BQE6 289 aaPredicted RBP3.78□□□□□ -1.8
GTF3A-207ENST00000482655 MVB12BQ9H7P6 319 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 HSPB7Q9UBY9 170 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 HAO1Q9UJM8 370 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 FAM96BQ9Y3D0 163 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 SLIT3O75094 1523 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 CRB1P82279 1406 aa3.78□□□□□ -1.8
GTF3A-207ENST00000482655 POLR3AO14802 1390 aaPredicted RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 CICQ96RK0 1608 aaPredicted RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 EVPLQ92817 2033 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 IGLV5-52A0A0A0MRZ9 124 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 A0A1W2PQM1 296 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 hCG_1807616A0A1W2PRN6 198 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 TYW5A2RUC4 315 aaKnown RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 USP17L23D6RBM5 183 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 LINC01565O15544 149 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 IPO7O95373 1038 aaKnown RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 MLYCDO95822 493 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 SNRNP70P08621 437 aaKnown RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 CSH1P0DML2 217 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 CSH2P0DML3 217 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 TFPIP10646 304 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 KRT10P13645 584 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 CTPS1P17812 591 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 MAPK4P31152 587 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 TTKP33981 857 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 KRT20P35900 424 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 PSMB10P40306 273 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 ADORA2A-AS1P86434 159 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 ACVR2BQ13705 512 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 FRG1Q14331 258 aaKnown RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 LPIN1Q14693 890 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 SF3B4Q15427 424 aaKnown RBP eCLIP3.77□□□□□ -1.812e-7■■■■■ 32.9
GTF3A-207ENST00000482655 GFI1BQ5VTD9 330 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 WBP2NLQ6ICG8 309 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 TTI2Q6NXR4 508 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 KLHL35Q6PF15 583 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 C16orf54Q6UWD8 224 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 ENOSF1Q7L5Y1 443 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 TBC1D26Q86UD7 250 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 TEX11Q8IYF3 940 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 TMEM116Q8NCL8 245 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 LILRB1Q8NHL6 650 aaPredicted RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 GTF3C6Q969F1 213 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms