RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PIM3Q86V86 326 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 C17orf82Q86X59 251 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-212ENST00000482251 CCDC170Q8IYT3 715 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 ZNF567Q8N184 647 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 IPMKQ8NFU5 416 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 PMEPA1Q969W9 287 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 TADA1Q96BN2 335 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 TEKT5Q96M29 485 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 QKIQ96PU8 341 aaKnown RBP eCLIP10.37□□□□□ -0.75
CPSF4-212ENST00000482251 HERPUD2Q9BSE4 406 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 KCNK4Q9NYG8 393 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 FOXJ2Q9P0K8 574 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 VPS18Q9P253 973 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 ATXN10Q9UBB4 475 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 TBC1D29Q9UFV1 150 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 DUSP10Q9Y6W6 482 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 IGHV1OR21-1A0A087WYE8 117 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 IGHV5-10-1A0A0J9YXX1 117 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 TMX2-CTNND1H3BSU7 103 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 GRID2O43424 1007 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 BUD23O43709 281 aaKnown RBP10.36□□□□□ -0.75
CPSF4-212ENST00000482251 ZRANB2O95218 330 aaKnown RBP eCLIP10.36□□□□□ -0.75
CPSF4-212ENST00000482251 SLC25A14O95258 325 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-212ENST00000482251 NDUFA10O95299 355 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 CCL4P13236 92 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 BPIP17213 487 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 CD1CP29017 333 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 NR2C2P49116 596 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 WNT3AP56704 352 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 HHEXQ03014 270 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 LRP8Q14114 963 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 NR1D2Q14995 579 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 INSCQ1MX18 579 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 KHDC1Q4VXA5 237 aaKnown RBP10.36□□□□□ -0.75
CPSF4-212ENST00000482251 SNAP47Q5SQN1 464 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 KIAA1614Q5VZ46 1190 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 AADACL2Q6P093 401 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 KDELC1Q6UW63 502 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 RAD9BQ6WBX8 426 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 ZNF574Q6ZN55 896 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-212ENST00000482251 BZW1Q7L1Q6 419 aaKnown RBP10.36□□□□□ -0.75
CPSF4-212ENST00000482251 TMC3Q7Z5M5 1100 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 VASH2Q86V25 355 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 NLRP8Q86W28 1048 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 ZFAND4Q86XD8 727 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 PHYKPLQ8IUZ5 450 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 JPH3Q8WXH2 748 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-212ENST00000482251 USP7Q93009 1102 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 OXNAD1Q96HP4 312 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-212ENST00000482251 RBM41Q96IZ5 413 aaKnown RBP10.36□□□□□ -0.75
CPSF4-212ENST00000482251 SLC38A3Q99624 504 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 CMKLR1Q99788 373 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 DPH1Q9BZG8 443 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 MAGEE1Q9HCI5 957 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 LUC7LQ9NQ29 371 aaKnown RBP10.36□□□□□ -0.75
CPSF4-212ENST00000482251 FAM153AQ9UHL3 310 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 RSPH14Q9UHP6 348 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 DNAJC16Q9Y2G8 782 aa10.36□□□□□ -0.75
CPSF4-212ENST00000482251 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.36□□□□□ -0.75
CPSF4-212ENST00000482251 REXO2Q9Y3B8 237 aaKnown RBP10.36□□□□□ -0.75
CPSF4-212ENST00000482251 TEX51A0A1B0GUA7 166 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 A8MU76 341 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 H7C0C1 242 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 ATXN7O15265 892 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-212ENST00000482251 NUAK1O60285 661 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 IPO7O95373 1038 aaKnown RBP10.35□□□□□ -0.75
CPSF4-212ENST00000482251 RBL1P28749 1068 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 CTNNA1P35221 906 aaKnown RBP10.35□□□□□ -0.75
CPSF4-212ENST00000482251 MLLT3P42568 568 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-212ENST00000482251 TNNT3P45378 269 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-212ENST00000482251 ATP5OP48047 213 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 UCNP55089 124 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 DCDC1P59894 354 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 CFHR1Q03591 330 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 OLIG2Q13516 323 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 PEX6Q13608 980 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 SLC14A2Q15849 920 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 TAF1BQ53T94 588 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-212ENST00000482251 SIRPB2Q5JXA9 342 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 CCDC70Q6NSX1 233 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 FAM151BQ6UXP7 276 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 BBS12Q6ZW61 710 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 PID1Q7Z2X4 250 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 GLT6D1Q7Z4J2 308 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 ADGRG6Q86SQ4 1221 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 GAS2L3Q86XJ1 694 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 FAM129CQ86XR2 697 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 RCOR2Q8IZ40 523 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 SFRP1Q8N474 314 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 TRAM1L1Q8N609 369 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 GDAP1Q8TB36 358 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 BLOC1S5Q8TDH9 187 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 HTR3CQ8WXA8 447 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 SLC39A7Q92504 469 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 GLYATL1Q969I3 302 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 CCDC97Q96F63 343 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-212ENST00000482251 AHCYL2Q96HN2 611 aaKnown RBP10.35□□□□□ -0.75
CPSF4-212ENST00000482251 MRFAP1L1Q96HT8 127 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 MRGPRX2Q96LB1 330 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 PANX2Q96RD6 677 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms