RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 TRIM49D1C9J1S8 452 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 GOLGA8TH3BQL2 631 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 EIF3FO00303 357 aaPredicted RBP10.08□□□□□ -0.8
USP39-215ENST00000481409 KPNA5O15131 536 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 PRPF4O43172 522 aaKnown RBP eCLIP10.08□□□□□ -0.8
USP39-215ENST00000481409 VEGFDO43915 354 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 HAUS5O94927 633 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 TBC1D3HP0C7X1 549 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 PKMP14618 531 aaKnown RBP10.08□□□□□ -0.8
USP39-215ENST00000481409 GM2AP17900 193 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 GABRB3P28472 473 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 TYK2P29597 1187 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 CD6P30203 668 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 TRIM23P36406 574 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 GPR1P46091 355 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 CCT5P48643 541 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 KPNA2P52292 529 aaKnown RBP10.08□□□□□ -0.8
USP39-215ENST00000481409 SLC18A2Q05940 514 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 GAS6Q14393 721 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 LRRC14Q15048 493 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 PTPRRQ15256 657 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 ZKSCAN8Q15776 578 aaPredicted RBP10.08□□□□□ -0.8
USP39-215ENST00000481409 DBN1Q16643 649 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 ATP13A5Q4VNC0 1218 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 TAF1BQ53T94 588 aaPredicted RBP10.08□□□□□ -0.8
USP39-215ENST00000481409 LRRC73Q5JTD7 316 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 MROH9Q5TGP6 573 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 TBC1D3GQ6DHY5 549 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 TBC1D3CQ6IPX1 549 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 LRRC8EQ6NSJ5 796 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 PSAPL1Q6NUJ1 521 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 PNCKQ6P2M8 343 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 SLC36A4Q6YBV0 504 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 MACC1Q6ZN28 852 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 C11orf74Q86VG3 221 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 EXOC3L1Q86VI1 746 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 PIANPQ8IYJ0 282 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 TBC1D3Q8IZP1 549 aaPredicted RBP10.08□□□□□ -0.8
USP39-215ENST00000481409 KRT222Q8N1A0 295 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 DCLK2Q8N568 766 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 CADM4Q8NFZ8 388 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 GLYATL1Q969I3 302 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 DCUN1D1Q96GG9 259 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 UHRF1Q96T88 793 aaPredicted RBP10.08□□□□□ -0.8
USP39-215ENST00000481409 AARSD1Q9BTE6 412 aaKnown RBP10.08□□□□□ -0.8
USP39-215ENST00000481409 RIOK2Q9BVS4 552 aaKnown RBP10.08□□□□□ -0.8
USP39-215ENST00000481409 SLC17A9Q9BYT1 436 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 P2RY12Q9H244 342 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 SYTL2Q9HCH5 934 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 CD320Q9NPF0 282 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 FBXO6Q9NRD1 293 aaPredicted RBP10.08□□□□□ -0.8
USP39-215ENST00000481409 LATS2Q9NRM7 1088 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 IL1RAPL1Q9NZN1 696 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 MARCH4Q9P2E8 410 aaPredicted RBP10.08□□□□□ -0.8
USP39-215ENST00000481409 CTNNAL1Q9UBT7 734 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 SERGEFQ9UGK8 458 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 DCDC2Q9UHG0 476 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 TLK1Q9UKI8 766 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 DMTF1Q9Y222 760 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 ITM2BQ9Y287 266 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 SPTBN5Q9NRC6 3674 aaKnown RBP10.08□□□□□ -0.8
USP39-215ENST00000481409 ATG2BQ96BY7 2078 aa10.08□□□□□ -0.8
USP39-215ENST00000481409 PLXND1Q9Y4D7 1925 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 EYSQ5T1H1 3165 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 A0A1W2PQU0 124 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 HMX2A2RU54 273 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 IGLON5A6NGN9 336 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 OR51F1A6NGY5 319 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 CCL22O00626 93 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 TM9SF1O15321 606 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 LATO43561 262 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 MAGEC1O60732 1142 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 VPS26AO75436 327 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 ZWINTO95229 277 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 SLC25A14O95258 325 aaPredicted RBP10.07□□□□□ -0.8
USP39-215ENST00000481409 SEMA4FO95754 770 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 OR56A5P0C7T3 313 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 ATP1B2P14415 290 aaPredicted RBP10.07□□□□□ -0.8
USP39-215ENST00000481409 KRT4P19013 534 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 MSH3P20585 1137 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 CCNFP41002 786 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 CSRP3P50461 194 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 RAB10P61026 200 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 MAGOHP61326 146 aaKnown RBP10.07□□□□□ -0.8
USP39-215ENST00000481409 MPP1Q00013 466 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 PLOD1Q02809 727 aaPredicted RBP10.07□□□□□ -0.8
USP39-215ENST00000481409 SEMA3AQ14563 771 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 USP10Q14694 798 aaKnown RBP10.07□□□□□ -0.8
USP39-215ENST00000481409 TSNAXIP1Q2TAA8 658 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 TTMPQ5BVD1 217 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 RAET1GQ6H3X3 334 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 CNSTQ6PJW8 725 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 BMP8AQ7Z5Y6 402 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 SRRM1Q8IYB3 904 aaKnown RBP10.07□□□□□ -0.8
USP39-215ENST00000481409 CYP4X1Q8N118 509 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 ARL8AQ96BM9 186 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 MRRFQ96E11 262 aaKnown RBP10.07□□□□□ -0.8
USP39-215ENST00000481409 HIC2Q96JB3 615 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 SPACA7Q96KW9 195 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 TSNARE1Q96NA8 513 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms