RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ISXQ2M1V0 245 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 MYLK3Q32MK0 819 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 CCDC14Q49A88 953 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 TCP11X2Q5H9J9 407 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 SEL1L3Q68CR1 1132 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 TRNP1Q6NT89 227 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 LVRNQ6Q4G3 990 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 PARS2Q7L3T8 475 aaKnown RBP6.52□□□□□ -1.37
LRCH3-216ENST00000481048 TTC7BQ86TV6 843 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 NOP9Q86U38 636 aaKnown RBP6.52□□□□□ -1.37
LRCH3-216ENST00000481048 NLRP14Q86W24 1093 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 FAM131BQ86XD5 332 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 ZNF548Q8NEK5 533 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-216ENST00000481048 MAPK15Q8TD08 544 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 RXFP2Q8WXD0 754 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 SEC14L1Q92503 715 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 ARHGEF2Q92974 986 aaKnown RBP6.52□□□□□ -1.37
LRCH3-216ENST00000481048 DVL3Q92997 716 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-216ENST00000481048 NAT6Q93015 286 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 NTAN1Q96AB6 310 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 LGMNQ99538 433 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 KLF6Q99612 283 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-216ENST00000481048 IL12RB2Q99665 862 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 SSBP3Q9BWW4 388 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-216ENST00000481048 CLSTN2Q9H4D0 955 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 FZD3Q9NPG1 666 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 THSD1Q9NS62 852 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 DKK3Q9UBP4 350 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 ST6GALNAC2Q9UJ37 374 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 AJAP1Q9UKB5 411 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-216ENST00000481048 PCDHGA8Q9Y5G5 932 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 RAI2Q9Y5P3 530 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 SNX10Q9Y5X0 201 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 U3KQA8 63 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 LRP4O75096 1905 aa6.52□□□□□ -1.37
LRCH3-216ENST00000481048 CFAP69A5D8W1 941 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 ANKRD34BA5PLL1 514 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 SIGLEC16A6NMB1 481 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 LMO7DNF2Z398 122 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 GOLGA8SH3BPF8 625 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 TMX2-CTNND1H3BSU7 103 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 RNF103O00237 685 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 KRIT1O00522 736 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 PES1O00541 588 aaKnown RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 RAD51BO15315 384 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 FFAR2O15552 330 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 SUV39H1O43463 412 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 RAMP2O60895 175 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 USP12O75317 370 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 CSO75390 466 aaKnown RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 TM7SF2O76062 418 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 CALB1P05937 261 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 PLEKP08567 350 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 PNMA6AP0CW24 399 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 KRT3P12035 628 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 UNGP13051 313 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 DESP17661 470 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 RBMS1P29558 406 aaKnown RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 HTR7P34969 479 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 SOX5P35711 763 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 ACVRL1P37023 503 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 STAT1P42224 750 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 THOP1P52888 689 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 GABREP78334 506 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 FMO1Q01740 532 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 CDR2Q01850 454 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 ELP6Q0PNE2 266 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 CCDC173Q0VFZ6 552 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 DPCR1Q3MIW9 517 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 TAF3Q5VWG9 929 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 NAA35Q5VZE5 725 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 RWDD4Q6NW29 188 aaKnown RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 ESRP1Q6NXG1 681 aaKnown RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 GDPD4Q6W3E5 623 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 RBM44Q6ZP01 1051 aaKnown RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 MILR1Q7Z6M3 343 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 SLFN11Q7Z7L1 901 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 DRC7Q8IY82 874 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 FSTL5Q8N475 847 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 OR6C4Q8NGE1 309 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 IFI44Q8TCB0 444 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 CXorf40AQ8TE69 158 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 TBC1D31Q96DN5 1066 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 LCORQ96JN0 433 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 GDAP1L1Q96MZ0 367 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 SLC46A1Q96NT5 459 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 MYOCQ99972 504 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 BOCQ9BWV1 1114 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 SLC13A1Q9BZW2 595 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 TM6SF2Q9BZW4 377 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 TTYH3Q9C0H2 523 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 ZDHHC6Q9H6R6 413 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 CATSPERBQ9H7T0 1116 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 NOCTQ9UK39 431 aaKnown RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 EMC9Q9Y3B6 208 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 ZNF462Q96JM2 2506 aa6.51□□□□□ -1.37
LRCH3-216ENST00000481048 GCN1Q92616 2671 aaKnown RBP6.51□□□□□ -1.37
LRCH3-216ENST00000481048 CPED1A4D0V7 1026 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 ANKRD62A6NC57 917 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 EIF3CLB5ME19 914 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms