RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 LRRC49Q8IUZ0 686 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 PLD5Q8N7P1 536 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 ZSCAN1Q8NBB4 408 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 KCTD6Q8NC69 237 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 ZNF564Q8TBZ8 553 aaPredicted RBP13.15□□□□□ -0.3
PTPN7-212ENST00000480836 FATE1Q969F0 183 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 FAM83DQ9H4H8 585 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 SARS2Q9NP81 518 aaKnown RBP13.15□□□□□ -0.3
PTPN7-212ENST00000480836 VPS18Q9P253 973 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 SHOC2Q9UQ13 582 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 HECTD1Q9ULT8 2610 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 GRID2O43424 1007 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 MTX2O75431 263 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 FURINP09958 794 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 BRAFP15056 766 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 KDELR1P24390 212 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 SLC19A1P41440 591 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 MAPK9P45984 424 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 POLE2P56282 527 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 UBE2IP63279 158 aaKnown RBP13.14□□□□□ -0.31
PTPN7-212ENST00000480836 SH3BP2P78314 561 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 ZBED6P86452 979 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 TLE1Q04724 770 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 SRSF1Q07955 248 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTPN7-212ENST00000480836 LRP8Q14114 963 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 ASTE1Q2TB18 679 aaPredicted RBP13.14□□□□□ -0.31
PTPN7-212ENST00000480836 DCAF12Q5T6F0 453 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 ALS2CLQ60I27 953 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 BORAQ6PGQ7 559 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 ADGRG6Q86SQ4 1221 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 ZNF547Q8IVP9 402 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 CCDC13Q8IYE1 715 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 TADA1Q96BN2 335 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 RNF157Q96PX1 679 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 ZNF670Q9BS34 389 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 MLPHQ9BV36 600 aaPredicted RBP13.14□□□□□ -0.31
PTPN7-212ENST00000480836 OR2AG1Q9H205 316 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 ZNF71Q9NQZ8 489 aaPredicted RBP13.14□□□□□ -0.31
PTPN7-212ENST00000480836 SIDT1Q9NXL6 827 aaKnown RBP13.14□□□□□ -0.31
PTPN7-212ENST00000480836 AKAP7Q9P0M2 348 aaPredicted RBP13.14□□□□□ -0.31
PTPN7-212ENST00000480836 CPNE7Q9UBL6 633 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 SPO11Q9Y5K1 396 aa13.14□□□□□ -0.31
PTPN7-212ENST00000480836 HEMK1Q9Y5R4 338 aaPredicted RBP13.14□□□□□ -0.31
PTPN7-212ENST00000480836 KIF1CO43896 1103 aaKnown RBP13.13□□□□□ -0.31
PTPN7-212ENST00000480836 DLGAP3O95886 979 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 PRKAR1AP10644 381 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 F3P13726 295 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 TYRP1P17643 537 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 CASP14P31944 242 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 LEPRP48357 1165 aaKnown RBP13.13□□□□□ -0.31
PTPN7-212ENST00000480836 UBASH3AP57075 661 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 PPIDQ08752 370 aaKnown RBP13.13□□□□□ -0.31
PTPN7-212ENST00000480836 NOMO1Q15155 1222 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 TMC3Q7Z5M5 1100 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 NDUFAF2Q8N183 169 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 CCNYQ8ND76 341 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 OR10G6Q8NH81 332 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 SPATA22Q8NHS9 363 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 HDAC11Q96DB2 347 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 AHCYL2Q96HN2 611 aaKnown RBP13.13□□□□□ -0.31
PTPN7-212ENST00000480836 SLC45A3Q96JT2 553 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 ASPSCR1Q9BZE9 553 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 EPN3Q9H201 632 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 AKIRIN1Q9H9L7 192 aaPredicted RBP13.13□□□□□ -0.31
PTPN7-212ENST00000480836 FBXO8Q9NRD0 319 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 KLC4Q9NSK0 619 aa13.13□□□□□ -0.31
PTPN7-212ENST00000480836 TMEM184BQ9Y519 407 aaPredicted RBP13.13□□□□□ -0.31
PTPN7-212ENST00000480836 BZW2Q9Y6E2 419 aaKnown RBP13.13□□□□□ -0.31
PTPN7-212ENST00000480836 SYCE3A1L190 88 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 CHUKO15111 745 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 PPFIA2O75334 1257 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 STK17BO94768 372 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 MT-CYBP00156 380 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-212ENST00000480836 CES1P23141 567 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 NFKBIAP25963 317 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 NOP2P46087 812 aaKnown RBP13.12□□□□□ -0.31
PTPN7-212ENST00000480836 ATP1A2P50993 1020 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 RPL26P61254 145 aaKnown RBP13.12□□□□□ -0.31
PTPN7-212ENST00000480836 PPP1CAP62136 330 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 IFI35P80217 286 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-212ENST00000480836 KCNAB2Q13303 367 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 PDK2Q15119 407 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 HADHQ16836 314 aaKnown RBP13.12□□□□□ -0.31
PTPN7-212ENST00000480836 PLA2G4EQ3MJ16 856 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 TIGD7Q6NT04 549 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-212ENST00000480836 CRTC3Q6UUV7 619 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 C11orf96Q7Z7L8 435 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 NLGN4XQ8N0W4 816 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 NLGN4YQ8NFZ3 816 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-212ENST00000480836 IMP4Q96G21 291 aaKnown RBP13.12□□□□□ -0.31
PTPN7-212ENST00000480836 AGAP3Q96P47 875 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 CARD9Q9H257 536 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 IFNKQ9P0W0 207 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 CTTNBP2NLQ9P2B4 639 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 SAE1Q9UBE0 346 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-212ENST00000480836 AMACRQ9UHK6 382 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 RPL26L1Q9UNX3 145 aaKnown RBP13.12□□□□□ -0.31
PTPN7-212ENST00000480836 WDR37Q9Y2I8 494 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 HYOU1Q9Y4L1 999 aa13.12□□□□□ -0.31
PTPN7-212ENST00000480836 GPR39O43194 453 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms