RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ADAM2Q99965 735 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 ARHGAP39Q9C0H5 1083 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 ALG2Q9H553 416 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 GIT1Q9Y2X7 761 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 VWA7Q9Y334 891 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 E9PAM4 449 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 SOAT2O75908 522 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 RSL1D1O76021 490 aaKnown RBP13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 BCL10O95999 233 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 TCF3P15923 654 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 WNT3AP56704 352 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 GRSF1Q12849 480 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 PAGE3Q5JUK9 113 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 CCNYL2Q5T2Q4 361 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 MFSD4BQ5TF39 518 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 PIK3R6Q5UE93 754 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 ZNF280BQ86YH2 543 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 KLHDC8BQ8IXV7 354 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 MIER2Q8N344 545 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 TTC9BQ8N6N2 239 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 TWIST2Q8WVJ9 160 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 CCDC126Q96EE4 140 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 FSD1LQ9BXM9 530 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 TRIM15Q9C019 465 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 MID1IP1Q9NPA3 183 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 POLR3BQ9NW08 1133 aaPredicted RBP13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 PKD2L2Q9NZM6 624 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 OAS3Q9Y6K5 1087 aaKnown RBP13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 FNDC1Q4ZHG4 1894 aaPredicted RBP13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 BBIP1A8MTZ0 92 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 PEX11BO96011 259 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 HOXD12P35452 270 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 ATP4BP51164 291 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 MGAT3Q09327 533 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 SLC10A7Q0GE19 358 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 SPIDRQ14159 915 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 ACAP2Q15057 778 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 ALFQ53S48 1182 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 NIPAL1Q6NVV3 410 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 CIR1Q86X95 450 aaPredicted RBP13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 TRUB1Q8WWH5 349 aaKnown RBP13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 HEPHQ9BQS7 1158 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 MRGBPQ9NV56 204 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 GNPTGQ9UJJ9 305 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 ST14Q9Y5Y6 855 aa13.24□□□□□ -0.29
PDZRN3-208ENST00000479530 TMEM247A6NEH6 219 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 SEC14L2O76054 403 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 BAIAP3O94812 1187 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 RBP1P09455 135 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 MBL2P11226 248 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 HGFP14210 728 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 IL7RP16871 459 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 GRK4P32298 578 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 RPL9P32969 192 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 OPRL1P41146 370 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 CASP2P42575 452 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 ARSDP51689 593 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 HUNKP57058 714 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 LIPEQ05469 1076 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 GALNT1Q10472 559 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 BNIP2Q12982 314 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 AQP6Q13520 282 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 SPCS2Q15005 226 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 SLC39A12Q504Y0 691 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 KIAA0930Q6ICG6 404 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 ZNF773Q6PK81 442 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 MRPL10Q7Z7H8 261 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 SERINC5Q86VE9 423 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 KIAA2013Q8IYS2 634 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 CLYBLQ8N0X4 340 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 TUBGCP3Q96CW5 907 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 MYEOVQ96EZ4 313 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 NT5MQ9NPB1 228 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 ABI2Q9NYB9 513 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 CRYL1Q9Y2S2 319 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 KRBA1A5PL33 1030 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 HTR3EA5X5Y0 456 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 CLASP2O75122 1294 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 CLPXO76031 633 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 IGHA2P01877 340 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 SLC4A1P02730 911 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 CCR1P32246 355 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 EIF2B2P49770 351 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 DSC2Q02487 901 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 ITKQ08881 620 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 C17orf99Q6UX52 265 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 COLGALT2Q8IYK4 626 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 HMCESQ96FZ2 354 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 MARCH4Q9P2E8 410 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 POLG2Q9UHN1 485 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 SLC30A1Q9Y6M5 507 aa13.23□□□□□ -0.29
PDZRN3-208ENST00000479530 AP3B1O00203 1094 aa13.22□□□□□ -0.29
PDZRN3-208ENST00000479530 NOL3O60936 208 aaKnown RBP13.22□□□□□ -0.29
PDZRN3-208ENST00000479530 XYLBO75191 536 aa13.22□□□□□ -0.29
PDZRN3-208ENST00000479530 GPIP06744 558 aa13.22□□□□□ -0.29
PDZRN3-208ENST00000479530 PCNAP12004 261 aa13.22□□□□□ -0.29
PDZRN3-208ENST00000479530 CD86P42081 329 aa13.22□□□□□ -0.29
PDZRN3-208ENST00000479530 PLA2G16P53816 162 aa13.22□□□□□ -0.29
PDZRN3-208ENST00000479530 TMBIM6P55061 237 aa13.22□□□□□ -0.29
PDZRN3-208ENST00000479530 HERVK_113P63132 956 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 239.4 ms