RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PCDH12Q9NPG4 1184 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 ZNF71Q9NQZ8 489 aaPredicted RBP6.64□□□□□ -1.35
VCP-205ENST00000479300 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.64□□□□□ -1.35
VCP-205ENST00000479300 CTTNBP2NLQ9P2B4 639 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 KLQ9UEF7 1012 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 ANAPC7Q9UJX3 599 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 CAPN11Q9UMQ6 739 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 ST14Q9Y5Y6 855 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 CREBBPQ92793 2442 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 CRYBG3Q68DQ2 2970 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 IGHV5-10-1A0A0J9YXX1 117 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 TSPAN11A1L157 253 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 GOLGA6BA6NDN3 693 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 TMEM202A6NGA9 273 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 NKX2-8O15522 239 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 IPO7O95373 1038 aaKnown RBP6.63□□□□□ -1.35
VCP-205ENST00000479300 FUCA1P04066 466 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 PRKCGP05129 697 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 KRT7P08729 469 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 GLB1P16278 677 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 GM2AP17900 193 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 NR1D1P20393 614 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 AMPD1P23109 780 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 PAX7P23759 505 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 UGT1A3P35503 534 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 GJC1P36383 396 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 EPHB1P54762 984 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 MAZP56270 477 aaKnown RBP6.63□□□□□ -1.35
VCP-205ENST00000479300 OR1D5P58170 312 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 PEX6Q13608 980 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 TRIM14Q14142 442 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 ARHGEF7Q14155 803 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 INPP5AQ14642 412 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 SMTNL2Q2TAL5 461 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 C14orf28Q4W4Y0 310 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 RALGPS1Q5JS13 557 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 PHF19Q5T6S3 580 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 ATP1A1-AS1Q5TC04 95 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 MARC1Q5VT66 337 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 DENND2CQ68D51 928 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 TIGD7Q6NT04 549 aaPredicted RBP6.63□□□□□ -1.35
VCP-205ENST00000479300 ALKBH5Q6P6C2 394 aaKnown RBP6.63□□□□□ -1.35
VCP-205ENST00000479300 C17orf82Q86X59 251 aaPredicted RBP6.63□□□□□ -1.35
VCP-205ENST00000479300 ZSWIM9Q86XI8 627 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 LRRC49Q8IUZ0 686 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 FAM26EQ8N5C1 309 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 ZSCAN1Q8NBB4 408 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 KCTD6Q8NC69 237 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 OR6C4Q8NGE1 309 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 ZNF483Q8TF39 744 aaPredicted RBP6.63□□□□□ -1.35
VCP-205ENST00000479300 P3H4Q92791 437 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 CALR3Q96L12 384 aaKnown RBP6.63□□□□□ -1.35
VCP-205ENST00000479300 ARHGEF17Q96PE2 2063 aaPredicted RBP6.63□□□□□ -1.35
VCP-205ENST00000479300 PSKH2Q96QS6 385 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 PEBP4Q96S96 227 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 CMKLR1Q99788 373 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 SYT11Q9BT88 431 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 NUP85Q9BW27 656 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 SPRY4Q9C004 299 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 TMEM168Q9H0V1 697 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 THAP2Q9H0W7 228 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 PDFQ9HBH1 243 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 MRPL40Q9NQ50 206 aaKnown RBP6.63□□□□□ -1.35
VCP-205ENST00000479300 PHPT1Q9NRX4 125 aaPredicted RBP6.63□□□□□ -1.35
VCP-205ENST00000479300 PLSCR2Q9NRY7 297 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 SEPT10Q9P0V9 454 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 RCOR3Q9P2K3 495 aaPredicted RBP6.63□□□□□ -1.35
VCP-205ENST00000479300 LRIT1Q9P2V4 623 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 TUBD1Q9UJT1 453 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 B3GALT1Q9Y5Z6 326 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 DGKBQ9Y6T7 804 aa6.63□□□□□ -1.35
VCP-205ENST00000479300 A8MX80 341 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 B4DGG1 531 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 AKR1B15C9JRZ8 316 aaPredicted RBP6.62□□□□□ -1.35
VCP-205ENST00000479300 STMND1H3BQB6 276 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 LIN7AO14910 233 aaPredicted RBP6.62□□□□□ -1.35
VCP-205ENST00000479300 MTSS1O43312 755 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 AKR1B10O60218 316 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 BUB1BO60566 1050 aaPredicted RBP6.62□□□□□ -1.35
VCP-205ENST00000479300 SOCS5O75159 536 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 RECQL5O94762 991 aaPredicted RBP6.62□□□□□ -1.35
VCP-205ENST00000479300 SNUPNO95149 360 aaKnown RBP6.62□□□□□ -1.35
VCP-205ENST00000479300 H2AFZP0C0S5 128 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 RHOXF2BP0C7M4 288 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 RARAP10276 462 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 PNLIPP16233 465 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 CES1P23141 567 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 CD82P27701 267 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 CD1CP29017 333 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 VIPR1P32241 457 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 CSF2RBP32927 897 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 MMP12P39900 470 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 MMP13P45452 471 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 UQCRFS1P47985 274 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 CD97P48960 835 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 PPM1FP49593 454 aaPredicted RBP6.62□□□□□ -1.35
VCP-205ENST00000479300 NAP1L1P55209 391 aaKnown RBP6.62□□□□□ -1.35
VCP-205ENST00000479300 KIAA1024LP59773 190 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 GNGT1P63211 74 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 DPYSQ14117 519 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms