RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 OR4K2Q8NGD2 314 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 GRK7Q8WTQ7 553 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 SLCO2A1Q92959 643 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 SGSM3Q96HU1 749 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 MS4A14Q96JA4 679 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 OR2M4Q96R27 311 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 APOL2Q9BQE5 337 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 ZCCHC2Q9C0B9 1178 aaKnown RBP15.32■□□□□ 0.04
C9orf3-217ENST00000479161 ANGPTL2Q9UKU9 493 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 NEU2Q9Y3R4 380 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 ARL5AQ9Y689 179 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 SAR1BQ9Y6B6 198 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 DNMT3AQ9Y6K1 912 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-217ENST00000479161 OAS3Q9Y6K5 1087 aaKnown RBP15.32■□□□□ 0.04
C9orf3-217ENST00000479161 UNC13CQ8NB66 2214 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 INPP4BO15327 924 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 PHF2O75151 1096 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 APRTP07741 180 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 TPSB2P20231 275 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 GNPDA1P46926 289 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 KCNJ1P48048 391 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 POLD2P49005 469 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 DAB2P98082 770 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 XIAPP98170 497 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 OLIG2Q13516 323 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 SPARCL1Q14515 664 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 TPSAB1Q15661 275 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 SKIDA1Q1XH10 827 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 ALS2CLQ60I27 953 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 CCDC137Q6PK04 289 aaKnown RBP15.31■□□□□ 0.04
C9orf3-217ENST00000479161 TAF8Q7Z7C8 310 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 ADGRG6Q86SQ4 1221 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 NRROSQ86YC3 692 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 SLC35F3Q8IY50 421 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 ZNF398Q8TD17 642 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 HEXDCQ8WVB3 486 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 ZNF514Q96K75 400 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-217ENST00000479161 BPIFA1Q9NP55 256 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 NLE1Q9NVX2 485 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-217ENST00000479161 ATXN10Q9UBB4 475 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 TMPRSS11EQ9UL52 423 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 GPR34Q9UPC5 381 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 TMEM98Q9Y2Y6 226 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 BPTFQ12830 3046 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 ACACBO00763 2458 aa15.31■□□□□ 0.04
C9orf3-217ENST00000479161 HEATR9A2RTY3 570 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 GRID2O43424 1007 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 SRP72O76094 671 aaKnown RBP15.3■□□□□ 0.04
C9orf3-217ENST00000479161 ASMTLO95671 621 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 CELA2BP08218 269 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-217ENST00000479161 ETS1P14921 441 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 ADRA1DP25100 572 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 CTBSQ01459 385 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 ACVR1Q04771 509 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 TMEM115Q12893 351 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-217ENST00000479161 DNAJC3Q13217 504 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 NFATC2Q13469 925 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 MYLKQ15746 1914 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 CHRNA6Q15825 494 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 TTC27Q6P3X3 843 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 NYAP1Q6ZVC0 841 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 CREG2Q8IUH2 290 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 FAM46DQ8NEK8 389 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 PTCD2Q8WV60 388 aaKnown RBP15.3■□□□□ 0.04
C9orf3-217ENST00000479161 ULK4Q96C45 1275 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 GRAMD1AQ96CP6 724 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 RUNDC3BQ96NL0 473 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 TIMM29Q9BSF4 260 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 CAAP1Q9H8G2 361 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 PCYOX1Q9UHG3 505 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 MOSPD1Q9UJG1 213 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 PADI4Q9UM07 663 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 PIKFYVEQ9Y2I7 2098 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 MSRB2Q9Y3D2 182 aa15.3■□□□□ 0.04
C9orf3-217ENST00000479161 CHD8Q9HCK8 2581 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 TRBV5-4A0A0C4DH59 114 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 PRR19A6NJB7 356 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 KMOO15229 486 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 NUDT21O43809 227 aaKnown RBP15.29■□□□□ 0.04
C9orf3-217ENST00000479161 NOBOXO60393 691 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 CDK14O94921 469 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 PRAMEF1O95521 474 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 SLC4A1P02730 911 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 ZSCAN5DPP0CG00 497 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 GLB1P16278 677 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 ZNF8P17098 575 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-217ENST00000479161 KCNA4P22459 653 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 NPY2RP49146 381 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 LMAN1P49257 510 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 ETF1P62495 437 aaKnown RBP15.29■□□□□ 0.04
C9orf3-217ENST00000479161 SARNPP82979 210 aaKnown RBP15.29■□□□□ 0.04
C9orf3-217ENST00000479161 FAM151BQ6UXP7 276 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 PPP1R21Q6ZMI0 780 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 SNX20Q7Z614 316 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 TRIM74Q86UV6 250 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 DNAAF3Q8N9W5 541 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 OR52K1Q8NGK4 314 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 CDKN2AIPNLQ96HQ2 116 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 AP1M1Q9BXS5 423 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 IL22Q9GZX6 179 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms