RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 CFAP52Q8N1V2 620 aa27.37■■□□□ 1.97
CHKB-208ENST00000479003 ELMOD1Q8N336 334 aa27.37■■□□□ 1.97
CHKB-208ENST00000479003 PTGR2Q8N8N7 351 aaPredicted RBP27.37■■□□□ 1.97
CHKB-208ENST00000479003 TMEM102Q8N9M5 508 aaPredicted RBP27.37■■□□□ 1.97
CHKB-208ENST00000479003 PAPOLBQ9NRJ5 636 aaKnown RBP27.37■■□□□ 1.97
CHKB-208ENST00000479003 HACD3Q9P035 362 aa27.37■■□□□ 1.97
CHKB-208ENST00000479003 A0A1W2PRU2 124 aa27.36■■□□□ 1.97
CHKB-208ENST00000479003 F5H5T6 163 aa27.36■■□□□ 1.97
CHKB-208ENST00000479003 SCAMP3O14828 347 aaKnown RBP27.36■■□□□ 1.97
CHKB-208ENST00000479003 NRP2O60462 931 aa27.36■■□□□ 1.97
CHKB-208ENST00000479003 NDST3O95803 873 aa27.36■■□□□ 1.97
CHKB-208ENST00000479003 TRAP1Q12931 704 aaKnown RBP27.36■■□□□ 1.97
CHKB-208ENST00000479003 OR4D1Q15615 310 aa27.36■■□□□ 1.97
CHKB-208ENST00000479003 EML3Q32P44 896 aa27.36■■□□□ 1.97
CHKB-208ENST00000479003 C3orf30Q96M34 536 aa27.36■■□□□ 1.97
CHKB-208ENST00000479003 MGME1Q9BQP7 344 aa27.36■■□□□ 1.97
CHKB-208ENST00000479003 TFB2MQ9H5Q4 396 aaKnown RBP27.36■■□□□ 1.97
CHKB-208ENST00000479003 SPAG4Q9NPE6 437 aa27.36■■□□□ 1.97
CHKB-208ENST00000479003 AGO1Q9UL18 857 aaKnown RBP27.36■■□□□ 1.97
CHKB-208ENST00000479003 C15orf38-AP3S2A0A0A6YYH1 394 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 MRASO14807 208 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 PER2O15055 1255 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 HOXD9P28356 352 aaPredicted RBP27.35■■□□□ 1.97
CHKB-208ENST00000479003 SH3BP2P78314 561 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 FAM219BQ5XKK7 198 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 ARPINQ7Z6K5 226 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 RAB44Q7Z6P3 723 aaPredicted RBP27.35■■□□□ 1.97
CHKB-208ENST00000479003 RYBPQ8N488 228 aaPredicted RBP27.35■■□□□ 1.97
CHKB-208ENST00000479003 SPDYE1Q8NFV5 336 aaPredicted RBP27.35■■□□□ 1.97
CHKB-208ENST00000479003 EXT2Q93063 718 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 ATOH8Q96SQ7 321 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 CD300AQ9UGN4 299 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 CLASP2O75122 1294 aaKnown RBP27.35■■□□□ 1.97
CHKB-208ENST00000479003 RNASEH2AO75792 299 aaKnown RBP27.35■■□□□ 1.97
CHKB-208ENST00000479003 CDK14O94921 469 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 PIRTP0C851 137 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 MTHFD2P13995 350 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 CCR2P41597 374 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 CDH13P55290 713 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 ERVK-21P61565 698 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 SMAD3P84022 425 aaKnown RBP27.35■■□□□ 1.97
CHKB-208ENST00000479003 GPM6BQ13491 265 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 BBS5Q8N3I7 341 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 GALNT15Q8N3T1 639 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 ADAMTS19Q8TE59 1207 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 MRPS31Q92665 395 aaKnown RBP27.35■■□□□ 1.97
CHKB-208ENST00000479003 CDKN2AIPNLQ96HQ2 116 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 PRICKLE1Q96MT3 831 aaPredicted RBP27.35■■□□□ 1.97
CHKB-208ENST00000479003 MAGEH1Q9H213 219 aa27.35■■□□□ 1.97
CHKB-208ENST00000479003 INTS10Q9NVR2 710 aaKnown RBP27.35■■□□□ 1.97
CHKB-208ENST00000479003 A0A0D9SEW6 157 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 ATP6AP2A0A1C7CYW4 349 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 ATP6AP2O75787 350 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 CRTAMO95727 393 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 ALDOCP09972 364 aaKnown RBP27.34■■□□□ 1.97
CHKB-208ENST00000479003 THEMIS2Q5TEJ8 643 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 FBRSL1Q9HCM7 1045 aaKnown RBP27.34■■□□□ 1.97
CHKB-208ENST00000479003 ASAH2Q9NR71 780 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 NLE1Q9NVX2 485 aaPredicted RBP27.34■■□□□ 1.97
CHKB-208ENST00000479003 TMEM181Q9P2C4 612 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 CROTQ9UKG9 612 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 DNAJC15Q9Y5T4 150 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 CPQQ9Y646 472 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 H3BMM5 538 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 H3BNC9 293 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 UBXN8O00124 270 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 GPX3P22352 226 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 GRIA2P42262 883 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 SGSHP51688 502 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 STX1BP61266 288 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 IL23RQ5VWK5 629 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 OR9I1Q8NGQ6 314 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 PCDHAC1Q9H158 963 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 RETREG1Q9H6L5 497 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 AKTIPQ9H8T0 292 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 CNOT11Q9UKZ1 510 aaKnown RBP27.34■■□□□ 1.97
CHKB-208ENST00000479003 AP4B1Q9Y6B7 739 aa27.34■■□□□ 1.97
CHKB-208ENST00000479003 PDE4DIPQ5VU43 2346 aa27.33■■□□□ 1.97
CHKB-208ENST00000479003 PRORSD1PA6NEY8 169 aa27.33■■□□□ 1.97
CHKB-208ENST00000479003 SRP72O76094 671 aaKnown RBP27.33■■□□□ 1.97
CHKB-208ENST00000479003 MT-CO1P00395 513 aa27.33■■□□□ 1.97
CHKB-208ENST00000479003 PMLP29590 882 aa27.33■■□□□ 1.97
CHKB-208ENST00000479003 RPS24P62847 133 aaKnown RBP27.33■■□□□ 1.97
CHKB-208ENST00000479003 GNA12Q03113 381 aa27.33■■□□□ 1.97
CHKB-208ENST00000479003 RBM23Q86U06 439 aaKnown RBP27.33■■□□□ 1.97
CHKB-208ENST00000479003 FUNDC1Q8IVP5 155 aa27.33■■□□□ 1.97
CHKB-208ENST00000479003 ATP6V1E2Q96A05 226 aa27.33■■□□□ 1.97
CHKB-208ENST00000479003 SPATA16Q9BXB7 569 aa27.33■■□□□ 1.97
CHKB-208ENST00000479003 PBX4Q9BYU1 374 aa27.33■■□□□ 1.97
CHKB-208ENST00000479003 SEPT3Q9UH03 358 aa27.33■■□□□ 1.97
CHKB-208ENST00000479003 ZFP37Q9Y6Q3 630 aaPredicted RBP27.33■■□□□ 1.97
CHKB-208ENST00000479003 SIX3O95343 332 aaPredicted RBP27.32■■□□□ 1.96
CHKB-208ENST00000479003 HSPA13P48723 471 aa27.32■■□□□ 1.96
CHKB-208ENST00000479003 ZNF140P52738 457 aaPredicted RBP27.32■■□□□ 1.96
CHKB-208ENST00000479003 RHDQ02161 417 aa27.32■■□□□ 1.96
CHKB-208ENST00000479003 SNX31Q8N9S9 440 aa27.32■■□□□ 1.96
CHKB-208ENST00000479003 TTC16Q8NEE8 873 aa27.32■■□□□ 1.96
CHKB-208ENST00000479003 RIN3Q8TB24 985 aa27.32■■□□□ 1.96
CHKB-208ENST00000479003 LPGAT1Q92604 370 aa27.32■■□□□ 1.96
CHKB-208ENST00000479003 DUS3LQ96G46 650 aaKnown RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms