RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ANKRD12Q6UB98 2062 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 ZCWPW2A0A1B0GU75 182 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 C2CD4BA6NLJ0 364 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 ATP6V1G2-DDX39BF2Z307 99 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 ATICP31939 592 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 ISL1P61371 349 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 LIPEQ05469 1076 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 TOP3AQ13472 1001 aaPredicted RBP21.12■□□□□ 0.97
SDF4-206ENST00000478938 GPR50Q13585 617 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 NOL9Q5SY16 702 aaKnown RBP21.12■□□□□ 0.97
SDF4-206ENST00000478938 RAP1GAP2Q684P5 730 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 GLYATQ6IB77 296 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 CYHR1Q6ZMK1 362 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 ITCHQ96J02 903 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 CEP170P1Q96L14 293 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 SPON1Q9HCB6 807 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 ANKHQ9HCJ1 492 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 SEPT10Q9P0V9 454 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 ANKRD6Q9Y2G4 727 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 OR5K3A6NET4 321 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 NOS1APO75052 506 aaPredicted RBP21.12■□□□□ 0.97
SDF4-206ENST00000478938 FAM122CQ6P4D5 195 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 ZNF517Q6ZMY9 492 aaPredicted RBP21.12■□□□□ 0.97
SDF4-206ENST00000478938 TCAIMQ8N3R3 496 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 TMEM125Q96AQ2 219 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 C17orf62Q9BQA9 187 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 MSTO1Q9BUK6 570 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 NUAK2Q9H093 628 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 KAT8Q9H7Z6 458 aaKnown RBP21.12■□□□□ 0.97
SDF4-206ENST00000478938 POLR3BQ9NW08 1133 aaPredicted RBP21.12■□□□□ 0.97
SDF4-206ENST00000478938 INVSQ9Y283 1065 aa21.12■□□□□ 0.97
SDF4-206ENST00000478938 BBIP1A8MTZ0 92 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 FMO3P31513 532 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 HCAR3P49019 387 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 ST13P50502 369 aaKnown RBP21.11■□□□□ 0.97
SDF4-206ENST00000478938 INCA1Q0VD86 236 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 MFSD10Q14728 455 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 ESCO2Q56NI9 601 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 IL31Q6EBC2 164 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.11■□□□□ 0.97
SDF4-206ENST00000478938 PIWIL4Q7Z3Z4 852 aaKnown RBP21.11■□□□□ 0.97
SDF4-206ENST00000478938 CUZD1Q86UP6 607 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 C3orf30Q96M34 536 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 TMEM74Q96NL1 305 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 FEM1AQ9BSK4 669 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 LHX5Q9H2C1 402 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 AGO4Q9HCK5 861 aaKnown RBP21.11■□□□□ 0.97
SDF4-206ENST00000478938 RIPK3Q9Y572 518 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 LEUTXA8MZ59 168 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 GOT2P00505 430 aaKnown RBP21.11■□□□□ 0.97
SDF4-206ENST00000478938 IL7P13232 177 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 CD36P16671 472 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 TSPAN8P19075 237 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 HRH2P25021 359 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 PARP15Q460N3 678 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 KCNMB4Q86W47 210 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 LRRC20Q8TCA0 184 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 NECTIN4Q96NY8 510 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 BBS2Q9BXC9 721 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 TM9SF3Q9HD45 589 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 NDUFAF1Q9Y375 327 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 RGPD3A6NKT7 1758 aaPredicted RBP21.11■□□□□ 0.97
SDF4-206ENST00000478938 RGPD4Q7Z3J3 1758 aa21.11■□□□□ 0.97
SDF4-206ENST00000478938 CAPN5O15484 640 aaPredicted RBP21.1■□□□□ 0.97
SDF4-206ENST00000478938 PGK2P07205 417 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 TCP10Q12799 353 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 PPP1R8Q12972 351 aaKnown RBP21.1■□□□□ 0.97
SDF4-206ENST00000478938 TRIP4Q15650 581 aaPredicted RBP21.1■□□□□ 0.97
SDF4-206ENST00000478938 LRRC26Q2I0M4 334 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 DPH6Q7L8W6 267 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 RIMKLAQ8IXN7 391 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 LILRB1Q8NHL6 650 aaPredicted RBP21.1■□□□□ 0.97
SDF4-206ENST00000478938 MCMBPQ9BTE3 642 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 LRRC4Q9HBW1 653 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 FBXO28Q9NVF7 368 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 TEKT2Q9UIF3 430 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 VPS4AQ9UN37 437 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 PCDHGB1Q9Y5G3 927 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 CNTNAP1P78357 1384 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 BPTFQ12830 3046 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 PRMT5O14744 637 aaPredicted RBP21.1■□□□□ 0.97
SDF4-206ENST00000478938 OR7A10O76100 309 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 EPN2O95208 641 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 KCNA5P22460 613 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 CLK1P49759 484 aaKnown RBP21.1■□□□□ 0.97
SDF4-206ENST00000478938 PLK1P53350 603 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 ZNF45Q02386 682 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 GMCL1P1Q8NEA9 526 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 OR4M1Q8NGD0 313 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.1■□□□□ 0.97
SDF4-206ENST00000478938 PYCR2Q96C36 320 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 GPR22Q99680 433 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 GON7Q9BXV9 100 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 FAM49BQ9NUQ9 324 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 BTBD3Q9Y2F9 522 aa21.1■□□□□ 0.97
SDF4-206ENST00000478938 A0A0U1RQS6 177 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 H3BQ06 376 aaPredicted RBP21.09■□□□□ 0.97
SDF4-206ENST00000478938 PGK1P00558 417 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 MT-ND2P03891 347 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 UMPSP11172 480 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms