RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 SNIP1Q8TAD8 396 aaKnown RBP18.58■□□□□ 0.56
SREBF1-212ENST00000478616 SLC35B2Q8TB61 432 aa18.58■□□□□ 0.56
SREBF1-212ENST00000478616 ANP32EQ9BTT0 268 aa18.58■□□□□ 0.56
SREBF1-212ENST00000478616 GPR63Q9BZJ6 419 aa18.58■□□□□ 0.56
SREBF1-212ENST00000478616 FOXP3Q9BZS1 431 aa18.58■□□□□ 0.56
SREBF1-212ENST00000478616 IL26Q9NPH9 171 aa18.58■□□□□ 0.56
SREBF1-212ENST00000478616 LRIT1Q9P2V4 623 aa18.58■□□□□ 0.56
SREBF1-212ENST00000478616 SLC23A2Q9UGH3 650 aa18.58■□□□□ 0.56
SREBF1-212ENST00000478616 RSPH14Q9UHP6 348 aa18.58■□□□□ 0.56
SREBF1-212ENST00000478616 SATB2Q9UPW6 733 aa18.58■□□□□ 0.56
SREBF1-212ENST00000478616 AK5Q9Y6K8 562 aa18.58■□□□□ 0.56
SREBF1-212ENST00000478616 CHUKO15111 745 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 KCNN4O15554 427 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 MTX2O75431 263 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 OR1D5P58170 312 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 ZFP36L1Q07352 338 aaKnown RBP18.57■□□□□ 0.56
SREBF1-212ENST00000478616 ATP13A5Q4VNC0 1218 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 IGF2-ASQ6U949 168 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 ZNF574Q6ZN55 896 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-212ENST00000478616 SLITRK4Q8IW52 837 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 GLYATL1Q969I3 302 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 SPATA13Q96N96 652 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 APOL2Q9BQE5 337 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 FICDQ9BVA6 458 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 SPATA16Q9BXB7 569 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 POLR1BQ9H9Y6 1135 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 TBC1D29Q9UFV1 150 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 KCTD3Q9Y597 815 aa18.57■□□□□ 0.56
SREBF1-212ENST00000478616 LOC400499M0QZD8 3231 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 MIF4GDA9UHW6 222 aaKnown RBP18.56■□□□□ 0.56
SREBF1-212ENST00000478616 ASMTLO95671 621 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 HLA-DPA1P20036 260 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 SPIDRQ14159 915 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 COL28A1Q2UY09 1125 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 C3orf38Q5JPI3 329 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 KCTD11Q693B1 232 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 XKR5Q6UX68 686 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 C11orf96Q7Z7L8 435 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 GALNT13Q8IUC8 556 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 CDKL3Q8IVW4 592 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-212ENST00000478616 RNF10Q8N5U6 811 aaKnown RBP18.56■□□□□ 0.56
SREBF1-212ENST00000478616 OR6C4Q8NGE1 309 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 SLC37A2Q8TED4 501 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 HNRNPLLQ8WVV9 542 aaKnown RBP18.56■□□□□ 0.56
SREBF1-212ENST00000478616 CCDC97Q96F63 343 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-212ENST00000478616 PLEKHG4BQ96PX9 1271 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 ZSCAN5AQ9BUG6 496 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 CDH19Q9H159 772 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 OR2AG1Q9H205 316 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 CARD9Q9H257 536 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 KCNK6Q9Y257 313 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 AHCTF1Q8WYP5 2266 aa18.56■□□□□ 0.56
SREBF1-212ENST00000478616 C5orf60A6NFR6 353 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 TJP3O95049 919 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 METTL18O95568 372 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 CD1CP29017 333 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 CSF2RBP32927 897 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 SIX1Q15475 284 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-212ENST00000478616 CHRNA6Q15825 494 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 ZNF569Q5MCW4 686 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-212ENST00000478616 DARS2Q6PI48 645 aaKnown RBP18.55■□□□□ 0.56
SREBF1-212ENST00000478616 CHST15Q7LFX5 561 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-212ENST00000478616 SYCE1Q8N0S2 351 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 SFRP1Q8N474 314 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 WDR48Q8TAF3 677 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 LIN37Q96GY3 246 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-212ENST00000478616 VPS35Q96QK1 796 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 GFM1Q96RP9 751 aaKnown RBP18.55■□□□□ 0.56
SREBF1-212ENST00000478616 TRIM39Q9HCM9 518 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 SCHIP1Q9P0W5 487 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-212ENST00000478616 ZNHIT2Q9UHR6 403 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 GUCA1BQ9UMX6 200 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 ARL5AQ9Y689 179 aa18.55■□□□□ 0.56
SREBF1-212ENST00000478616 SMG1Q96Q15 3661 aaKnown RBP18.55■□□□□ 0.56
SREBF1-212ENST00000478616 TRBV23OR9-2A0A075B6M9 112 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 CDRT15L2A8MXV6 281 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 GRID2O43424 1007 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 UGT1A9O60656 530 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 SLC25A14O95258 325 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-212ENST00000478616 ACP5P13686 325 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 HGFP14210 728 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 HOXB3P14651 431 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-212ENST00000478616 UGT1A6P19224 532 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 UGT1A1P22309 533 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 UGT1A4P22310 534 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 CCKBRP32239 447 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 UGT1A3P35503 534 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 UGT1A5P35504 534 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 GSDMDP57764 484 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 LRP8Q14114 963 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 SPARCL1Q14515 664 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 CCDC181Q5TID7 509 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 PDPK2PQ6A1A2 396 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 ZNF761Q86XN6 746 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-212ENST00000478616 LRRC8AQ8IWT6 810 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 DTX3LQ8TDB6 740 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 BLOC1S5Q8TDH9 187 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 ATG4AQ8WYN0 398 aa18.54■□□□□ 0.56
SREBF1-212ENST00000478616 FGF11Q92914 225 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms