RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 ARHGEF18Q6ZSZ5 1173 aa14.47□□□□□ -0.09
USP11-207ENST00000478596 FSTL5Q8N475 847 aaPredicted RBP14.47□□□□□ -0.09
USP11-207ENST00000478596 SH2D3CQ8N5H7 860 aa14.47□□□□□ -0.09
USP11-207ENST00000478596 PRELID2Q8N945 189 aa14.47□□□□□ -0.09
USP11-207ENST00000478596 FAM71DQ8N9W8 422 aa14.47□□□□□ -0.09
USP11-207ENST00000478596 FEM1CQ96JP0 617 aa14.47□□□□□ -0.09
USP11-207ENST00000478596 GDAP1L1Q96MZ0 367 aa14.47□□□□□ -0.09
USP11-207ENST00000478596 TSGA13Q96PP4 275 aa14.47□□□□□ -0.09
USP11-207ENST00000478596 PDFQ9HBH1 243 aa14.47□□□□□ -0.09
USP11-207ENST00000478596 RSPH14Q9UHP6 348 aa14.47□□□□□ -0.09
USP11-207ENST00000478596 HS3ST2Q9Y278 367 aa14.47□□□□□ -0.09
USP11-207ENST00000478596 CTAGE15A4D2H0 777 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 EFCAB7A8K855 629 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 F5H423 210 aaPredicted RBP14.46□□□□□ -0.09
USP11-207ENST00000478596 K7ERQ8 282 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 AGRPO00253 132 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 ZMPSTE24O75844 475 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 ECEL1O95672 775 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 JCHAINP01591 159 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 PRNPP04156 253 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 CTAGE8P0CG41 777 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 TNNT3P45378 269 aaPredicted RBP14.46□□□□□ -0.09
USP11-207ENST00000478596 FNTAP49354 379 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 CDC20Q12834 499 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 ZBTB17Q13105 803 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 C16orf72Q14CZ0 275 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 SIX1Q15475 284 aaPredicted RBP14.46□□□□□ -0.09
USP11-207ENST00000478596 CFAP58Q5T655 872 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 TCTN3Q6NUS6 607 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 TMPRSS9Q7Z410 1059 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 CTAGE6Q86UF2 777 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 CTAGE4Q8IX94 777 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 CACNA2D3Q8IZS8 1091 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 PCDH20Q8N6Y1 951 aaKnown RBP14.46□□□□□ -0.09
USP11-207ENST00000478596 CEP112Q8N8E3 955 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 DENND6BQ8NEG7 585 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 OR2A12Q8NGT7 310 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 SLC35B2Q8TB61 432 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 ASB12Q8WXK4 309 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 RUNDC3BQ96NL0 473 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 AGAP3Q96P47 875 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 TAAR9Q96RI9 348 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 C1QTNF2Q9BXJ5 285 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 CEP44Q9C0F1 390 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 DDX47Q9H0S4 455 aaKnown RBP14.46□□□□□ -0.09
USP11-207ENST00000478596 ZDHHC6Q9H6R6 413 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 RBM22Q9NW64 420 aaKnown RBP eCLIP14.46□□□□□ -0.09
USP11-207ENST00000478596 AKAP7Q9P0M2 348 aaPredicted RBP14.46□□□□□ -0.09
USP11-207ENST00000478596 SIRPGQ9P1W8 387 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 DKK3Q9UBP4 350 aa14.46□□□□□ -0.09
USP11-207ENST00000478596 APCP25054 2843 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 FBN3Q75N90 2809 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 PDE2AO00408 941 aaPredicted RBP14.45□□□□□ -0.1
USP11-207ENST00000478596 MT-CO1P00395 513 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 HLA-DQB2P05538 268 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 CELA2BP08218 269 aaPredicted RBP14.45□□□□□ -0.1
USP11-207ENST00000478596 CCL4P13236 92 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 PNLIPP16233 465 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 HSPA9P38646 679 aaKnown RBP14.45□□□□□ -0.1
USP11-207ENST00000478596 KCNJ1P48048 391 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 VPS41P49754 854 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 THOP1P52888 689 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 SNRPD1P62314 119 aaKnown RBP14.45□□□□□ -0.1
USP11-207ENST00000478596 IFI35P80217 286 aaPredicted RBP14.45□□□□□ -0.1
USP11-207ENST00000478596 RAD51Q06609 339 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 SLC10A7Q0GE19 358 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 ELOCQ15369 112 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 INO80DQ53TQ3 878 aaPredicted RBP14.45□□□□□ -0.1
USP11-207ENST00000478596 ATXN7L2Q5T6C5 722 aaPredicted RBP14.45□□□□□ -0.1
USP11-207ENST00000478596 FAXCQ5TGI0 409 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 TAB3Q8N5C8 712 aaPredicted RBP14.45□□□□□ -0.1
USP11-207ENST00000478596 OR6K2Q8NGY2 324 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 CPT1CQ8TCG5 803 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 GRIN3AQ8TCU5 1115 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 KRT12Q99456 494 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 VAT1Q99536 393 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 POLR1EQ9GZS1 481 aaKnown RBP14.45□□□□□ -0.1
USP11-207ENST00000478596 DOLKQ9UPQ8 538 aa14.45□□□□□ -0.1
USP11-207ENST00000478596 SDK2Q58EX2 2172 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 TTLL8A6PVC2 850 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 K7EM74 188 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 SMAD6O43541 496 aaKnown RBP14.44□□□□□ -0.1
USP11-207ENST00000478596 AP1G1O43747 822 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 DUX1O43812 170 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 ALPIP09923 528 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 PRKAR1AP10644 381 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 CA4P22748 312 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 PTPN3P26045 913 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 OAS2P29728 719 aaKnown RBP14.44□□□□□ -0.1
USP11-207ENST00000478596 COILP38432 576 aaPredicted RBP14.44□□□□□ -0.1
USP11-207ENST00000478596 LMAN1P49257 510 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 BLKP51451 505 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 NEK3P51956 506 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 MAXP61244 160 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 YPEL5P62699 121 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 DR1Q01658 176 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 SGCGQ13326 291 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 PRPSAP1Q14558 356 aa14.44□□□□□ -0.1
USP11-207ENST00000478596 OASLQ15646 514 aaKnown RBP14.44□□□□□ -0.1
USP11-207ENST00000478596 CRTC2Q53ET0 693 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms