RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 HDAC10Q969S8 669 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 STAMBPL1Q96FJ0 436 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 EBNA1BP2Q99848 306 aaKnown RBP11.38□□□□□ -0.59
CBWD3-206ENST00000478048 APOOQ9BUR5 198 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 CDH19Q9H159 772 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 FAM96AQ9H5X1 160 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 ANKZF1Q9H8Y5 726 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 PLAC1Q9HBJ0 212 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 MRM3Q9HC36 420 aaKnown RBP11.38□□□□□ -0.59
CBWD3-206ENST00000478048 ARFGAP3Q9NP61 516 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 RAD18Q9NS91 495 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 IL1RAPL1Q9NZN1 696 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 SAMD15Q9P1V8 674 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 RIMKLBQ9ULI2 386 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 CHMP2BQ9UQN3 213 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 TEX264Q9Y6I9 313 aa11.38□□□□□ -0.59
CBWD3-206ENST00000478048 TMEM131Q92545 1883 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 FAM237BA0A1B0GVD1 139 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 A0A1B0GVT2 93 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 A6NNZ2 444 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 H7C0S8 307 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 SRP72O76094 671 aaKnown RBP11.37□□□□□ -0.59
CBWD3-206ENST00000478048 PRAMEF1O95521 474 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 GNSP15586 552 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 TSHRP16473 764 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 ARNTP27540 789 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 CDK3Q00526 305 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 BNC1Q01954 994 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 LAMB3Q13751 1172 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 HLTFQ14527 1009 aaKnown RBP eCLIP11.37□□□□□ -0.59
CBWD3-206ENST00000478048 ANKRD20A4Q4UJ75 823 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 ZNF648Q5T619 568 aaPredicted RBP11.37□□□□□ -0.59
CBWD3-206ENST00000478048 ZDHHC20Q5W0Z9 365 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 KCTD16Q68DU8 428 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 TCEAL6Q6IPX3 200 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 NLRP9Q7RTR0 991 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 TMEM135Q86UB9 458 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 CCDC25Q86WR0 208 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 SPATS2Q86XZ4 545 aaKnown RBP11.37□□□□□ -0.59
CBWD3-206ENST00000478048 IFT20Q8IY31 132 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 TCEAL3Q969E4 200 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 ZNF669Q96BR6 464 aaPredicted RBP11.37□□□□□ -0.59
CBWD3-206ENST00000478048 KLHDC7BQ96G42 594 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 ZSCAN5AQ9BUG6 496 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 TEX101Q9BY14 249 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 WDR26Q9H7D7 661 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 SAYSD1Q9NPB0 183 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 SUSD2Q9UGT4 822 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 PNMA8BQ9ULN7 279 aaPredicted RBP11.37□□□□□ -0.59
CBWD3-206ENST00000478048 NFU1Q9UMS0 254 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 PCDHGA5Q9Y5G8 931 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 OAS3Q9Y6K5 1087 aaKnown RBP11.37□□□□□ -0.59
CBWD3-206ENST00000478048 RPS6KL1Q9Y6S9 549 aa11.37□□□□□ -0.59
CBWD3-206ENST00000478048 ZCWPW2A0A1B0GU75 182 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 MAGEB16A2A368 324 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 GOLGA8KD6RF30 607 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 GOLGA8TH3BQL2 631 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 TLR4O00206 839 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 VILLO15195 856 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 MTX2O75431 263 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 GOT2P00505 430 aaKnown RBP11.36□□□□□ -0.59
CBWD3-206ENST00000478048 CFIP05156 583 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 RETP07949 1114 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 RABIFP47224 123 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 PRAMEP78395 509 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 NFATC2Q13469 925 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 PDE1CQ14123 709 aaPredicted RBP11.36□□□□□ -0.59
CBWD3-206ENST00000478048 NAA30Q147X3 362 aaPredicted RBP11.36□□□□□ -0.59
CBWD3-206ENST00000478048 DUOXA1Q1HG43 343 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 KIF19Q2TAC6 998 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 TRIM61Q5EBN2 209 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 PSAPL1Q6NUJ1 521 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 ADAMTSL4Q6UY14 1074 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 CENPUQ71F23 418 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 IQCHQ86VS3 1027 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 PIANPQ8IYJ0 282 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 ZBED8Q8IZ13 594 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 UNC5BQ8IZJ1 945 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 FBXO36Q8NEA4 188 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 OR6P1Q8NGX9 317 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 FAM174AQ8TBP5 190 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 ZNF398Q8TD17 642 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 PEX13Q92968 403 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 C19orf43Q9BQ61 176 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 ASB8Q9H765 288 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 GPR27Q9NS67 375 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 APPL1Q9UKG1 709 aa11.36□□□□□ -0.59
CBWD3-206ENST00000478048 TMEM202A6NGA9 273 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 PRR5-ARHGAP8B1AHC4 643 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 PROB1E7EW31 1015 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 USP1O94782 785 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 VAPBO95292 243 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 MYBL2P10244 700 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 PGAM1P18669 254 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 TEAD1P28347 426 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 FOXN2P32314 431 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 HOXD12P35452 270 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 ARCN1P48444 511 aaKnown RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 IRX4P78413 519 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 SPEM2Q0P670 501 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms