RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CFAP57Q96MR6 1250 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 LRFN5Q96NI6 719 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 AGAP3Q96P47 875 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 PLEKHG4BQ96PX9 1271 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 GSX1Q9H4S2 264 aaPredicted RBP7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 PDFQ9HBH1 243 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 MCCC2Q9HCC0 563 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 UBE2TQ9NPD8 197 aaPredicted RBP7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 WASH6PQ9NQA3 447 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 EPHA6Q9UF33 1036 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 CNOT8Q9UFF9 292 aaKnown RBP7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 TMEM59LQ9UK28 342 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 SNX7Q9UNH6 387 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 HPSEQ9Y251 543 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 CSAG2Q9Y5P2 127 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 IGHV5-51A0A0C4DH38 117 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 A0A0U1RQS6 177 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 A0A1B0GVL5 298 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 WASH4PA8MWX3 477 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 J3KR12 359 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 MEN1O00255 615 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 GRID2O43424 1007 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 CPNE3O75131 537 aaKnown RBP7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 SLC2A4P14672 509 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 PFKFB1P16118 471 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 AMD1P17707 334 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 LHCGRP22888 699 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 PRCPP42785 496 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 KIR3DL1P43629 444 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 TSFMP43897 325 aaKnown RBP7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 GPR1P46091 355 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 CAPZBP47756 277 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 GABRB2P47870 512 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 SOX8P57073 446 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 BCL2L1Q07817 233 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 NSUN2Q08J23 767 aaKnown RBP eCLIP7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 KCNAB1Q14722 419 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 KYNUQ16719 465 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 DCAF10Q5QP82 559 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 PLEKHS1Q5SXH7 462 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 DENND2CQ68D51 928 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 ADAMTSL4Q6UY14 1074 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 SPOCD1Q6ZMY3 1216 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 RFLNAQ6ZTI6 216 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 FAM92BQ6ZTR7 304 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 CHST15Q7LFX5 561 aaPredicted RBP7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 TRIM74Q86UV6 250 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 NLRP8Q86W28 1048 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 GALNT16Q8N428 558 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 RTL3Q8N8U3 475 aaKnown RBP7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 ZNF454Q8N9F8 522 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 AVL9Q8NBF6 648 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 TSEN2Q8NCE0 465 aaKnown RBP7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 SHC3Q92529 594 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 TM9SF4Q92544 642 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 RSC1A1Q92681 617 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 TBC1D31Q96DN5 1066 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 COX14Q96I36 57 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 TRAPPC9Q96Q05 1148 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 RAB33BQ9H082 229 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 SYNCQ9H7C4 482 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 SCHIP1Q9P0W5 487 aaPredicted RBP7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 UBA2Q9UBT2 640 aaPredicted RBP7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 AJAP1Q9UKB5 411 aaPredicted RBP7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 NOVA2Q9UNW9 492 aaKnown RBP7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 KCNK6Q9Y257 313 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 NEU2Q9Y3R4 380 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 PRKAB1Q9Y478 270 aa7.21□□□□□ -1.26
SPTLC1-205ENST00000477888 GOLGA6CA6NDK9 693 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 GOLGA6BA6NDN3 693 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 TMEM200CA6NKL6 621 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 PSMD11O00231 422 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 HTRA2O43464 458 aaPredicted RBP7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 KLHL41O60662 606 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 SNX2O60749 519 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 PRAMEF11O60813 436 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 JRKO75564 520 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 IPO13O94829 963 aaKnown RBP7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 JCHAINP01591 159 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 KLK3P07288 261 aaPredicted RBP7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 GOLGA6DP0CG33 693 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 TNFAIP3P21580 790 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 CMA1P23946 247 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 VIPR1P32241 457 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 SLC19A1P41440 591 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 ATP11AP98196 1134 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 OTUD4Q01804 1114 aaKnown RBP7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 ACY1Q03154 408 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 TLE4Q04727 773 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 PTPRRQ15256 657 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 PARP15Q460N3 678 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 FAM102AQ5T9C2 384 aaPredicted RBP7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 ZNF324BQ6AW86 544 aaPredicted RBP7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 XKRXQ6PP77 449 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 RPTNQ6XPR3 784 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 CERS6Q6ZMG9 384 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 ENOSF1Q7L5Y1 443 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 ARCQ7LC44 396 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 TGIF2LYQ8IUE0 185 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 DSELQ8IZU8 1212 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms