RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 PCDH9Q9HC56 1237 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 MTMR10Q9NXD2 777 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 MCM9Q9NXL9 1143 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 SMARCAL1Q9NZC9 954 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 ZNF224Q9NZL3 707 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 OGFRQ9NZT2 677 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 MALT1Q9UDY8 824 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 ADD3Q9UEY8 706 aaKnown RBP2.54□□□□□ -2
CACUL1-202ENST00000477583 FBXL17Q9UF56 701 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 OR14J1Q9UGF5 321 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 SIX4Q9UIU6 781 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 VPS28Q9UK41 221 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 FBXW11Q9UKB1 542 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 ACSL5Q9ULC5 683 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 KCNS2Q9ULS6 477 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 PADI3Q9ULW8 664 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 NENFQ9UMX5 172 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 LOXL2Q9Y4K0 774 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 NOTCH3Q9UM47 2321 aa2.54□□□□□ -2
CACUL1-202ENST00000477583 KIF26BQ2KJY2 2108 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 PDS5AQ29RF7 1337 aaKnown RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 hCG_1807616A0A1W2PRN6 198 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 GOLGA6L9A6NEM1 432 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 ZNF587BE7ETH6 402 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 HS6ST1O60243 411 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 DAB1O75553 588 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 TPPPO94811 219 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 SRPRAP08240 638 aaKnown RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 DAOP14920 347 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 ALOX12P18054 663 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 S1PR1P21453 382 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 ACADLP28330 430 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 CORO1AP31146 461 aaKnown RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 HOXA13P31271 388 aaPredicted RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 PSMB10P40306 273 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 APOBEC1P41238 236 aaKnown RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 FASLGP48023 281 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 TAS2R38P59533 333 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 TFAP4Q01664 338 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 SLC20A2Q08357 652 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 LRMPQ12912 555 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 PRKG2Q13237 762 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 MAD2L1Q13257 205 aaPredicted RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 SNTA1Q13424 505 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 TNFAIP1Q13829 316 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 KIF19Q2TAC6 998 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 PCGF3Q3KNV8 242 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 C9orf57Q5W0N0 161 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 NSUN5P2Q63ZY6 315 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 TMEM198Q66K66 360 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 C18orf63Q68DL7 685 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 FAM122CQ6P4D5 195 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 CFAP161Q6P656 301 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 TMED8Q6PL24 325 aaPredicted RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 PRSS57Q6UWY2 283 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.53□□□□□ -2
CACUL1-202ENST00000477583 PCGF5Q86SE9 256 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 TSPAN33Q86UF1 283 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 SATL1Q86VE3 508 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 ODF3L1Q8IXM7 274 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 RPAP2Q8IXW5 612 aaPredicted RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 C17orf53Q8N3J3 647 aaPredicted RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 ACVR1CQ8NER5 493 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 OR1J2Q8NGS2 313 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 HM13Q8TCT9 377 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 MAGEC3Q8TD91 643 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 TAAR8Q969N4 342 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 NSUN4Q96CB9 384 aaKnown RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 BICD1Q96G01 975 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 TMEM19Q96HH6 336 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 ZNF385AQ96PM9 386 aaKnown RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 MTERF1Q99551 399 aaKnown RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 MAGIXQ9H6Y5 334 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 ZNF556Q9HAH1 456 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 PAG1Q9NWQ8 432 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 STK39Q9UEW8 545 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 FBXO2Q9UK22 296 aaPredicted RBP2.53□□□□□ -2
CACUL1-202ENST00000477583 KLHL20Q9Y2M5 609 aa2.53□□□□□ -2
CACUL1-202ENST00000477583 A0A0G2JPF8 293 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 A0A1W2PQ09 198 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 KANSL1LA0AUZ9 987 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 MAGEA13PA6NCF6 341 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 EIF4E1BA6NMX2 242 aaKnown RBP2.52□□□□□ -2.01
CACUL1-202ENST00000477583 CDRT15L2A8MXV6 281 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 HNRNPCL3B7ZW38 293 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 FAM90A26D6RGX4 464 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 HS3ST1O14792 307 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 OGG1O15527 345 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 KCNN4O15554 427 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 PLPP2O43688 288 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 AHCYL1O43865 530 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 GPC4O75487 556 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 HIST1H2ABP04908 130 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 HNRNPCL4P0DMR1 293 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 ACTN1P12814 892 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 PORP16435 677 aaPredicted RBP2.52□□□□□ -2.01
CACUL1-202ENST00000477583 HIST1H2ADP20671 130 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 UGT1A1P22309 533 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 PON1P27169 355 aa2.52□□□□□ -2.01
CACUL1-202ENST00000477583 ACTN2P35609 894 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms