RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 C17orf113A0A1B0GUU1 675 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 ZBBXA8MT70 800 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 COPEO14579 308 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 ADAMTS4O75173 837 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 PPM1BO75688 479 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 CST3P01034 146 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 IQCF3P0C7M6 154 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 KITP10721 976 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 UNGP13051 313 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 IL12RB1P42701 662 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 CPT1AP50416 773 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 SCNN1GP51170 649 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 TPMTP51580 245 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 PLA2G16P53816 162 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 MYL6P60660 151 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 SEMA3BQ13214 749 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 ELOAQ14241 798 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 PCBP1Q15365 356 aaKnown RBP eCLIP12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 AMHR2Q16671 573 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 PPP1R3AQ16821 1122 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 LIN9Q5TKA1 542 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 BRAT1Q6PJG6 821 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 WDR48Q8TAF3 677 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 VCPIP1Q96JH7 1222 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 SEC22CQ9BRL7 303 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 LHPPQ9H008 270 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 AP5M1Q9H0R1 490 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 TRPM5Q9NZQ8 1165 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 SHOC2Q9UQ13 582 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 TLR6Q9Y2C9 796 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 Q9Y3F1 56 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 M0R3G1 203 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 F2P00734 622 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 GNAO1P09471 354 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 CXCL8P10145 99 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 SLC7A1P30825 629 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 HMGCLP35914 325 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 MAPK10P53779 464 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 MS4A2Q01362 244 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 FLI1Q01543 452 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 RHDQ02161 417 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 TNK2Q07912 1038 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 MESDQ14696 234 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 RFTN1Q14699 578 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 MARCH8Q5T0T0 291 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 XAF1Q6GPH4 301 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 PRSS48Q7RTY5 328 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 ADCK1Q86TW2 530 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 KIAA0319LQ8IZA0 1049 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 MCOLN2Q8IZK6 566 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 DSELQ8IZU8 1212 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 SORT1Q99523 831 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 C12orf57Q99622 126 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 FUNDC2Q9BWH2 189 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 PDZD7Q9H5P4 517 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 PAK1IP1Q9NWT1 392 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 MARCOQ9UEW3 520 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 IPPQ9Y573 584 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 DOCK3Q8IZD9 2030 aa12.6□□□□□ -0.39
RTFDC1-207ENST00000477573 GPR25O00155 361 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 SEC24AO95486 1093 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 SLC10A3P09131 477 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 SPNP16150 400 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 ARF4P18085 180 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 CBLP22681 906 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 GPX6P59796 221 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 CTF1Q16619 201 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 MTX3Q5HYI7 312 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 KIAA1324Q6UXG2 1013 aaKnown RBP12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 BEND4Q6ZU67 534 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 TMPRSS9Q7Z410 1059 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 NT5DC4Q86YG4 428 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 LGI2Q8N0V4 545 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 OR7A2PQ8NGA2 310 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 SLC7A14Q8TBB6 771 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 LRTOMTQ8WZ04 291 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 ASB9Q96DX5 294 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 MRRFQ96E11 262 aaKnown RBP12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 C11orf24Q96F05 449 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 ARL5BQ96KC2 179 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 PPP1R16BQ96T49 567 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 APBA2Q99767 749 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 C6orf62Q9GZU0 229 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 DSN1Q9H410 356 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 SETD4Q9NVD3 440 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 IFT80Q9P2H3 777 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 GINS2Q9Y248 185 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 GMDSO60547 372 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 KRT19P08727 400 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 ZNF865P0CJ78 1059 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 SMIM10L2AP0DMW4 78 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 SMIM10L2BP0DMW5 78 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 ZNF30P17039 623 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 SYN1P17600 705 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 MPP1Q00013 466 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 TNK1Q13470 666 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 CBX2Q14781 532 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 FASTKD3Q14CZ7 662 aaKnown RBP12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 DCAF4L1Q3SXM0 396 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 PRAMEF19Q5SWL8 479 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms