RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 TIFABQ6ZNK6 161 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 RFLNAQ6ZTI6 216 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 SH2D5Q6ZV89 423 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 Q6ZVL8 140 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 TECPR1Q7Z6L1 1165 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 ASB12Q8WXK4 309 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 ATOH1Q92858 354 aaPredicted RBP16.78■□□□□ 0.28
EPHB4-204ENST00000477446 ORAI3Q9BRQ5 295 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 IRF2BPLQ9H1B7 796 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 RASSF4Q9H2L5 321 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.78■□□□□ 0.28
EPHB4-204ENST00000477446 KLHL14Q9P2G3 628 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 EIF2B4Q9UI10 523 aaKnown RBP16.78■□□□□ 0.28
EPHB4-204ENST00000477446 ARL5AQ9Y689 179 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 SDK1Q7Z5N4 2213 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 GON4LQ3T8J9 2241 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 A0A1W2PPC4 97 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 WNT9AO14904 365 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 BUD23O43709 281 aaKnown RBP16.77■□□□□ 0.28
EPHB4-204ENST00000477446 CRTAMO95727 393 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 HMGCLP35914 325 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 NPY2RP49146 381 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 ACTN3Q08043 901 aaPredicted RBP16.77■□□□□ 0.28
EPHB4-204ENST00000477446 AGERQ15109 404 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 LPAL2Q16609 132 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 SPANXN3Q5MJ09 141 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 LYSMD4Q5XG99 296 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 MARK2Q7KZI7 788 aaKnown RBP16.77■□□□□ 0.28
EPHB4-204ENST00000477446 TRPM8Q7Z2W7 1104 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 C10orf67Q8IYJ2 551 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 TCP10LQ8TDR4 215 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 DNASE2BQ8WZ79 361 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 PLAC1Q9HBJ0 212 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 FZD3Q9NPG1 666 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 BFARQ9NZS9 450 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 KCTD3Q9Y597 815 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 VPS13AQ96RL7 3174 aa16.77■□□□□ 0.28
EPHB4-204ENST00000477446 RAD51BO15315 384 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 LDB2O43679 373 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 POLBP06746 335 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 ITPKAP23677 461 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 CD27P26842 260 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 SPINT3P49223 89 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 WDR45BQ5MNZ6 344 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 CASC4Q6P4E1 433 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 TRIM42Q8IWZ5 723 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 RGL4Q8IZJ4 473 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 ACMSDQ8TDX5 336 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 DTD2Q96FN9 168 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 KLF6Q99612 283 aaPredicted RBP16.77■□□□□ 0.27
EPHB4-204ENST00000477446 BPIFA1Q9NP55 256 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 FAM86C1Q9NVL1 165 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 IL17CQ9P0M4 197 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 CD84Q9UIB8 345 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 HCN4Q9Y3Q4 1203 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 SLCO1B1Q9Y6L6 691 aa16.77■□□□□ 0.27
EPHB4-204ENST00000477446 C2orf81A6NN90 581 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 TRIM49D1C9J1S8 452 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 COPEO14579 308 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 DHRS4L1P0CG22 281 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 LPOP22079 712 aaPredicted RBP16.76■□□□□ 0.27
EPHB4-204ENST00000477446 HNRNPA2B1P22626 353 aaKnown RBP16.76■□□□□ 0.27
EPHB4-204ENST00000477446 MGAT1P26572 445 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 NUDT1P36639 197 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 CCNFP41002 786 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 CRADDP78560 199 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 SEPT6Q14141 434 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 PTPRCAPQ14761 206 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 WSCD2Q2TBF2 565 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 ARMC3Q5W041 872 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 CYP2U1Q7Z449 544 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 RAVER1Q8IY67 606 aaKnown RBP16.76■□□□□ 0.27
EPHB4-204ENST00000477446 MPP5Q8N3R9 675 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 TP53I13Q8NBR0 393 aaPredicted RBP16.76■□□□□ 0.27
EPHB4-204ENST00000477446 ZNF75CPQ92670 426 aaPredicted RBP16.76■□□□□ 0.27
EPHB4-204ENST00000477446 NUS1Q96E22 293 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 SERAC1Q96JX3 654 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 LENG8Q96PV6 779 aaPredicted RBP16.76■□□□□ 0.27
EPHB4-204ENST00000477446 MYOCQ99972 504 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 C1QTNF7Q9BXJ2 289 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 IL22Q9GZX6 179 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 IQCGQ9H095 443 aaKnown RBP16.76■□□□□ 0.27
EPHB4-204ENST00000477446 MIR1-1HGQ9H1L0 117 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 MBNL1Q9NR56 388 aaKnown RBP16.76■□□□□ 0.27
EPHB4-204ENST00000477446 PKD2L2Q9NZM6 624 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 DMTF1Q9Y222 760 aa16.76■□□□□ 0.27
EPHB4-204ENST00000477446 MROH6A6NGR9 719 aa16.75■□□□□ 0.27
EPHB4-204ENST00000477446 CXorf49A8MYA2 514 aaPredicted RBP16.75■□□□□ 0.27
EPHB4-204ENST00000477446 ANKRD65E5RJM6 399 aa16.75■□□□□ 0.27
EPHB4-204ENST00000477446 PRAMEF26H0Y7S4 382 aa16.75■□□□□ 0.27
EPHB4-204ENST00000477446 EDF1O60869 148 aaKnown RBP16.75■□□□□ 0.27
EPHB4-204ENST00000477446 PYGBP11216 843 aa16.75■□□□□ 0.27
EPHB4-204ENST00000477446 BPIP17213 487 aa16.75■□□□□ 0.27
EPHB4-204ENST00000477446 ADRA1DP25100 572 aa16.75■□□□□ 0.27
EPHB4-204ENST00000477446 ZNF140P52738 457 aaPredicted RBP16.75■□□□□ 0.27
EPHB4-204ENST00000477446 PDE1BQ01064 536 aa16.75■□□□□ 0.27
EPHB4-204ENST00000477446 PCID2Q5JVF3 399 aa16.75■□□□□ 0.27
EPHB4-204ENST00000477446 NRSN1Q8IZ57 195 aa16.75■□□□□ 0.27
EPHB4-204ENST00000477446 GPR26Q8NDV2 337 aa16.75■□□□□ 0.27
EPHB4-204ENST00000477446 C1orf216Q8TAB5 229 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms