RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TCEAL2Q9H3H9 227 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 DHX35Q9H5Z1 703 aaKnown RBP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 MRPL47Q9HD33 250 aaKnown RBP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 LRIT1Q9P2V4 623 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 LHX3Q9UBR4 397 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 ACTL7AQ9Y615 435 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 SCINQ9Y6U3 715 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 RP1P56715 2156 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 PSMD11O00231 422 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 DFFAO00273 331 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 HGSO14964 777 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 SOCS5O75159 536 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 RECQL5O94762 991 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 PIGNO95427 931 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 CPNE6O95741 557 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 CHRNB2P17787 502 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 CA4P22748 312 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 GPR3P46089 330 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 HCAR3P49019 387 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 PPM1FP49593 454 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 PAPOLAP51003 745 aaKnown RBP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 COPB1P53618 953 aaKnown RBP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 LY6DQ14210 128 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 LRRC73Q5JTD7 316 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 ATG14Q6ZNE5 492 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 DPPA4Q7L190 304 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 MON1BQ7L1V2 547 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 SHISA5Q8N114 240 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 Q8N9G6 341 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 KCT2Q8NC54 265 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 NUS1Q96E22 293 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 EXOC2Q96KP1 924 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 KCNF1Q9H3M0 494 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 LRRC19Q9H756 370 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 C1GALT1Q9NS00 363 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 TRNAU1APQ9NX07 287 aaKnown RBP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 SUCOQ9UBS9 1254 aaKnown RBP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 COQ6Q9Y2Z9 468 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 OR1A2Q9Y585 309 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 LRP4O75096 1905 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 LGALS16A8MUM7 142 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 B4DGG1 531 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 STMND1H3BQB6 276 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 TEX33O43247 280 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 PPFIA2O75334 1257 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 MYBL1P10243 752 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 MYCLP1P12525 358 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-214ENST00000477152 SLC2A4P14672 509 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 MAP4P27816 1152 aaKnown RBP7.25□□□□□ -1.25
BRCA1-214ENST00000477152 SERPINB6P35237 376 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 CSRP3P50461 194 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 SCNN1BP51168 640 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 MAPK10P53779 464 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 MYL5Q02045 173 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 PTP4A2Q12974 167 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 TPRG1LQ5T0D9 272 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 CDKAL1Q5VV42 579 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 AFMIDQ63HM1 303 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 SPECC1LQ69YQ0 1117 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 LETMD1Q6P1Q0 360 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 PNCKQ6P2M8 343 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 SEZ6L2Q6UXD5 910 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 LIPIQ6XZB0 460 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 USP45Q70EL2 814 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 CD163Q86VB7 1156 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 CAMK1DQ8IU85 385 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 LRRC49Q8IUZ0 686 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 MCOLN2Q8IZK6 566 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 PYROXD2Q8N2H3 581 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 AVL9Q8NBF6 648 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 DNAJB8Q8NHS0 232 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 AHCYL2Q96HN2 611 aaKnown RBP7.25□□□□□ -1.25
BRCA1-214ENST00000477152 CATSPER2Q96P56 530 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 GBP4Q96PP9 640 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 TAAR9Q96RI9 348 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 ERGIC2Q96RQ1 377 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 SEMA3CQ99985 751 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 ASPSCR1Q9BZE9 553 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 CDH19Q9H159 772 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 ADNPQ9H2P0 1102 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 PDFQ9HBH1 243 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 LIMA1Q9UHB6 759 aaKnown RBP7.25□□□□□ -1.25
BRCA1-214ENST00000477152 PHTF1Q9UMS5 762 aa7.25□□□□□ -1.25
BRCA1-214ENST00000477152 FAM170AA1A519 330 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 PRSS38A1L453 326 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 INSIG1O15503 277 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 CLEC3AO75596 197 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 CCNB1P14635 433 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 TEAD1P28347 426 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 VIPR1P32241 457 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 CSTF2P33240 577 aaKnown RBP eCLIP7.24□□□□□ -1.25
BRCA1-214ENST00000477152 TRIM23P36406 574 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 ZFP36L1Q07352 338 aaKnown RBP7.24□□□□□ -1.25
BRCA1-214ENST00000477152 STX1AQ16623 288 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 BOLA3Q53S33 107 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 ARTNQ5T4W7 220 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 KIAA1614Q5VZ46 1190 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 RFX8Q6ZV50 586 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 SPRED1Q7Z699 444 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 COL27A1Q8IZC6 1860 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms