RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 GOLGA8OA6NCC3 632 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 MOXD2PA6NHM9 499 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 EVPLLA8MZ36 301 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 GOLGA8NF8WBI6 632 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 VWA5AO00534 786 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 AP3D1O14617 1153 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 XPO1O14980 1071 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 ATP2A1O14983 1001 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TLR3O15455 904 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 PLA2G10O15496 165 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 PPM1BO75688 479 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 PRKD3O94806 890 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 APOA4P06727 396 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TSPY3P0CV98 308 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TSPY8P0CW00 308 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ARP10275 920 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 PRKACBP22694 351 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CES1P23141 567 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 NSFP46459 744 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 CPT1AP50416 773 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CLCN5P51795 746 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CACNB3P54284 484 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 RPL10AP62906 217 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 GSTO1P78417 241 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TMPRSS15P98073 1019 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 GBE1Q04446 702 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ZBTB16Q05516 673 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CD47Q08722 323 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 NME3Q13232 169 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ORC1Q13415 861 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 POLD3Q15054 466 aaPredicted RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 TBCEQ15813 527 aaPredicted RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 CA9Q16790 459 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 PPP1R3AQ16821 1122 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 PPM1JQ5JR12 505 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 SAMD4BQ5PRF9 694 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 PRMT9Q6P2P2 845 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 XKRXQ6PP77 449 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CD200R1LQ6Q8B3 271 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TMEM207Q6UWW9 146 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 NLRP8Q86W28 1048 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CELF2-AS1Q8N7Q2 184 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TTLL6Q8N841 843 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 LINC00116Q8NCU8 138 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 APOBEC4Q8WW27 367 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 HPS1Q92902 700 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 HDAC10Q969S8 669 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ZNF649Q9BS31 505 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 MLPHQ9BV36 600 aaPredicted RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 PRR14Q9BWN1 585 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 VPS33BQ9H267 617 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 EFCAB1Q9HAE3 211 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 HEBP1Q9NRV9 189 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 PLSCR3Q9NRY6 295 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TBC1D13Q9NVG8 400 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ZNF358Q9NW07 568 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 SH3BP4Q9P0V3 963 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ZNF711Q9Y462 761 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TNPO3Q9Y5L0 923 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 A0A1W2PRG0 241 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 C7orf66A4D0T2 115 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ERI2A8K979 691 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 KCNU1A8MYU2 1149 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 RNGTTO60942 597 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 SNAPINO95295 136 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 RECKO95980 971 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 KRT7P08729 469 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 MTHFD2P13995 350 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ARSAP15289 507 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CYP2B6P20813 491 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 GJC1P36383 396 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CCR10P46092 362 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 STAT2P52630 851 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 AP1S2P56377 157 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 S100A12P80511 92 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 PRKAA1Q13131 559 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 SMU1Q2TAY7 513 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 BBS9Q3SYG4 887 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ARL13AQ5H913 290 aaPredicted RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 TOR2AQ5JU69 321 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 HABP4Q5JVS0 413 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 BROXQ5VW32 411 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TMEM198Q66K66 360 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 GPR139Q6DWJ6 353 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 SULT1C3Q6IMI6 304 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 SYCE2Q6PIF2 218 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 OTOP3Q7RTS5 596 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CATSPER4Q7RTX7 472 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 AKAP14Q86UN6 197 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 SNX29P2Q8IUI4 249 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 LRRC56Q8IYG6 542 aaPredicted RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 NDUFAF2Q8N183 169 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 GALNT4Q8N4A0 578 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CHCHD4Q8N4Q1 142 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 BEST2Q8NFU1 509 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 JPH3Q8WXH2 748 aaPredicted RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 PTP4A1Q93096 173 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 NCLNQ969V3 563 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 PGAP3Q96FM1 320 aaPredicted RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 UBL7Q96S82 380 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms