RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 VPS35Q96QK1 796 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 BOCQ9BWV1 1114 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 FUT8Q9BYC5 575 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 FAM129AQ9BZQ8 928 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 FOXP3Q9BZS1 431 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 TCEAL2Q9H3H9 227 aaPredicted RBP10.28□□□□□ -0.76
CASC3-204ENST00000474190 SEMA4AQ9H3S1 761 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 FGF22Q9HCT0 170 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 ARFGAP3Q9NP61 516 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 SAYSD1Q9NPB0 183 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 RXFP3Q9NSD7 469 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 NINJ2Q9NZG7 142 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 SLC17A4Q9Y2C5 497 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 PRSS21Q9Y6M0 314 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 RPS6KL1Q9Y6S9 549 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 MYLKQ15746 1914 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 SCN8AQ9UQD0 1980 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 TNRC6BQ9UPQ9 1833 aaKnown RBP10.28□□□□□ -0.76
CASC3-204ENST00000474190 LRRK1Q38SD2 2015 aa10.28□□□□□ -0.76
CASC3-204ENST00000474190 BAHCC1Q9P281 2608 aa10.27□□□□□ -0.76
CASC3-204ENST00000474190 USP24Q9UPU5 2620 aa10.27□□□□□ -0.76
CASC3-204ENST00000474190 SPTY2D1-AS1A0A0U1RR47 76 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 A0A1B0GVT2 93 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 CXorf49A8MYA2 514 aaPredicted RBP10.27□□□□□ -0.77
CASC3-204ENST00000474190 TLR4O00206 839 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 INPP4BO15327 924 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 CTIFO43310 598 aaKnown RBP10.27□□□□□ -0.77
CASC3-204ENST00000474190 MTX2O75431 263 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 VAPBO95292 243 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 RETP07949 1114 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 NFKBIAP25963 317 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 CD38P28907 300 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 SSTR1P30872 391 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 HOXD12P35452 270 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 MPLP40238 635 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 HADHAP40939 763 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 MAGEA4P43358 317 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 POLD2P49005 469 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 CTSCP53634 463 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 PDE1BQ01064 536 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 TIAL1Q01085 375 aaKnown RBP eCLIP10.27□□□□□ -0.77
CASC3-204ENST00000474190 NFATC4Q14934 902 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 TYSND1Q2T9J0 566 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 GPRC6AQ5T6X5 926 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 PDPK2PQ6A1A2 396 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 RAET1GQ6H3X3 334 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 SLC23A3Q6PIS1 610 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 KANSL1Q7Z3B3 1105 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 SNX20Q7Z614 316 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 CNTN4Q8IWV2 1026 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 IFT20Q8IY31 132 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 ZBED8Q8IZ13 594 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 NXPE1Q8N323 547 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 GPR150Q8NGU9 434 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 ZNF398Q8TD17 642 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 AENQ8WTP8 325 aaKnown RBP10.27□□□□□ -0.77
CASC3-204ENST00000474190 PIGKQ92643 395 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 ZNF669Q96BR6 464 aaPredicted RBP10.27□□□□□ -0.77
CASC3-204ENST00000474190 C9orf72Q96LT7 481 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 FMO2Q99518 471 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 ZSCAN5AQ9BUG6 496 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 SPATA16Q9BXB7 569 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 PARD6BQ9BYG5 372 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 MIR1-1HGQ9H1L0 117 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 ARRDC1-AS1Q9H2J1 176 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 ZC3H7BQ9UGR2 993 aaKnown RBP10.27□□□□□ -0.77
CASC3-204ENST00000474190 MED16Q9Y2X0 877 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 TMEM98Q9Y2Y6 226 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 PKP3Q9Y446 797 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 PCDHGA5Q9Y5G8 931 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 SNX11Q9Y5W9 270 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 PSAT1Q9Y617 370 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 MAD1L1Q9Y6D9 718 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 CACNA1GO43497 2377 aa10.27□□□□□ -0.77
CASC3-204ENST00000474190 TPRP12270 2363 aaKnown RBP10.27□□□□□ -0.77
CASC3-204ENST00000474190 PLXNA2O75051 1894 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 A0A1B0GTW7 788 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 A6NNZ2 444 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 FPGTO14772 594 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 CHUKO15111 745 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 OR1I1O60431 355 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 S1PR4O95977 384 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 THEGLP0DJG4 465 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 GIMD1P0DJR0 217 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 ERVK-10P10266 1014 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 MYCLP1P12525 358 aaPredicted RBP10.26□□□□□ -0.77
CASC3-204ENST00000474190 ZNF8P17098 575 aaPredicted RBP10.26□□□□□ -0.77
CASC3-204ENST00000474190 ACRV1P26436 265 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 TNNT3P45378 269 aaPredicted RBP10.26□□□□□ -0.77
CASC3-204ENST00000474190 GPR1P46091 355 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 RABIFP47224 123 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 AFF3P51826 1226 aaKnown RBP10.26□□□□□ -0.77
CASC3-204ENST00000474190 YPEL5P62699 121 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 IRX4P78413 519 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 CACNG1Q06432 222 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 OVGP1Q12889 678 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 UAP1Q16222 522 aaPredicted RBP10.26□□□□□ -0.77
CASC3-204ENST00000474190 ALG11Q2TAA5 492 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 PRAMEF14Q5SWL7 426 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 TEDDM1Q5T9Z0 273 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms