RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KCTD16Q68DU8 428 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 CASC4Q6P4E1 433 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 ZNF534Q76KX8 674 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 PIP4P1Q86T03 277 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 GKN2Q86XP6 184 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 GALNT13Q8IUC8 556 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 NAT8LQ8N9F0 302 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 MCUQ8NE86 351 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 SCG3Q8WXD2 468 aaKnown RBP12.3□□□□□ -0.44
DDX56-209ENST00000473924 CDKN2AIPNLQ96HQ2 116 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 CDC6Q99741 560 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 TRIM51Q9BSJ1 452 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 TUBB2BQ9BVA1 445 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 TRIM31Q9BZY9 425 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 ZCCHC2Q9C0B9 1178 aaKnown RBP12.3□□□□□ -0.44
DDX56-209ENST00000473924 OR2AG1Q9H205 316 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 TRIM39Q9HCM9 518 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 XAB2Q9HCS7 855 aaKnown RBP12.3□□□□□ -0.44
DDX56-209ENST00000473924 SAMD15Q9P1V8 674 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 CRLS1Q9UJA2 301 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 PCOLCE2Q9UKZ9 415 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 TCAF1Q9Y4C2 921 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 CSNK1G3Q9Y6M4 447 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 MYLKQ15746 1914 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 ASCC3Q8N3C0 2202 aaKnown RBP12.29□□□□□ -0.44
DDX56-209ENST00000473924 FAM187AA6NFU0 413 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 EFCAB8A8MWE9 144 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 H7C0S8 307 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 GAPDHSO14556 408 aaPredicted RBP12.29□□□□□ -0.44
DDX56-209ENST00000473924 GPR39O43194 453 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 VEGFDO43915 354 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 AVILO75366 819 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 MTX2O75431 263 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 CDK14O94921 469 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 MLNP12872 115 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 CEACAM1P13688 526 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 AKT1P31749 480 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 NOVA1P51513 510 aaKnown RBP12.29□□□□□ -0.44
DDX56-209ENST00000473924 PRAMEP78395 509 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 XIAPP98170 497 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 ILF3Q12906 894 aaKnown RBP eCLIP12.29□□□□□ -0.44
DDX56-209ENST00000473924 NFATC2Q13469 925 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 PEX6Q13608 980 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 DEFB133Q30KQ1 61 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 ZNF648Q5T619 568 aaPredicted RBP12.29□□□□□ -0.44
DDX56-209ENST00000473924 RNASEH2BQ5TBB1 312 aaKnown RBP12.29□□□□□ -0.44
DDX56-209ENST00000473924 TAS2R42Q7RTR8 314 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 KANSL1Q7Z3B3 1105 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 ZNF572Q7Z3I7 529 aaPredicted RBP12.29□□□□□ -0.44
DDX56-209ENST00000473924 SNX20Q7Z614 316 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 TAF8Q7Z7C8 310 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 HOOK3Q86VS8 718 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 SDR16C5Q8N3Y7 309 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 MNS1Q8NEH6 495 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 OR4C6Q8NH72 309 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 PTCD2Q8WV60 388 aaKnown RBP12.29□□□□□ -0.44
DDX56-209ENST00000473924 ULK4Q96C45 1275 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 SNF8Q96H20 258 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 SERPINB12Q96P63 405 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 OR2M4Q96R27 311 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 DUSP23Q9BVJ7 150 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 GSDMCQ9BYG8 508 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 CLPBQ9H078 707 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 TMEM168Q9H0V1 697 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 RMI1Q9H9A7 625 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 CHRAC1Q9NRG0 131 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 TRNAU1APQ9NX07 287 aaKnown RBP12.29□□□□□ -0.44
DDX56-209ENST00000473924 SYBUQ9NX95 663 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 NLGN3Q9NZ94 848 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 ATXN10Q9UBB4 475 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 FTSJ1Q9UET6 329 aa12.29□□□□□ -0.44
DDX56-209ENST00000473924 ZNF106Q9H2Y7 1883 aaKnown RBP12.28□□□□□ -0.44
DDX56-209ENST00000473924 CABIN1Q9Y6J0 2220 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 SDR42E2A6NKP2 422 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 GPR89AB7ZAQ6 455 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 LMO7DNF2Z398 122 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 NDC80O14777 642 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 YY2O15391 372 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 GRID2O43424 1007 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 RAD51CO43502 376 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 NUAK1O60285 661 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 DNAJC6O75061 913 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 KCNK5O95279 499 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 LDOC1O95751 146 aaPredicted RBP12.28□□□□□ -0.44
DDX56-209ENST00000473924 FUCA1P04066 466 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 CELA2BP08218 269 aaPredicted RBP12.28□□□□□ -0.44
DDX56-209ENST00000473924 GPR89BP0CG08 455 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 ZNF8P17098 575 aaPredicted RBP12.28□□□□□ -0.44
DDX56-209ENST00000473924 MSH3P20585 1137 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 MRPS25P82663 173 aaKnown RBP12.28□□□□□ -0.44
DDX56-209ENST00000473924 TMEM115Q12893 351 aaPredicted RBP12.28□□□□□ -0.44
DDX56-209ENST00000473924 TRIP6Q15654 476 aaKnown RBP12.28□□□□□ -0.44
DDX56-209ENST00000473924 GPR33Q49SQ1 333 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 PYCR3Q53H96 274 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 GPRC6AQ5T6X5 926 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 PSAPL1Q6NUJ1 521 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 CHST15Q7LFX5 561 aaPredicted RBP12.28□□□□□ -0.44
DDX56-209ENST00000473924 ADGRG6Q86SQ4 1221 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 CAND1Q86VP6 1230 aaKnown RBP12.28□□□□□ -0.44
DDX56-209ENST00000473924 DDHD1Q8NEL9 900 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms