RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 LRRC40Q9H9A6 602 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 PIH1D1Q9NWS0 290 aaKnown RBP18.75■□□□□ 0.59
PTCD3-210ENST00000473829 PYCARDQ9ULZ3 195 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 JRKLQ9Y4A0 524 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 IGF2RP11717 2491 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 ACTR1BP42025 376 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 ZNF140P52738 457 aaPredicted RBP18.74■□□□□ 0.59
PTCD3-210ENST00000473829 ACTR1AP61163 376 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 E2F1Q01094 437 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 CDCP2Q5VXM1 449 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 DRICH1Q6PGQ1 229 aaPredicted RBP18.74■□□□□ 0.59
PTCD3-210ENST00000473829 PHYKPLQ8IUZ5 450 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 PRELID2Q8N945 189 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 MAPK15Q8TD08 544 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 PATE1Q8WXA2 126 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 NAT6Q93015 286 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 CCDC74AQ96AQ1 378 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 MS4A14Q96JA4 679 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 VPS35Q96QK1 796 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 ETNK1Q9HBU6 452 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 TRIM39Q9HCM9 518 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 SMARCAL1Q9NZC9 954 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.74■□□□□ 0.59
PTCD3-210ENST00000473829 ZNHIT2Q9UHR6 403 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 PKP3Q9Y446 797 aa18.74■□□□□ 0.59
PTCD3-210ENST00000473829 GLYATL1P3A0A0U1RQE8 302 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 STX7O15400 261 aaKnown RBP18.73■□□□□ 0.59
PTCD3-210ENST00000473829 NUAK1O60285 661 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 UGT1A9O60656 530 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 JUPP14923 745 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 TPH1P17752 444 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 UGT1A6P19224 532 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 LPOP22079 712 aaPredicted RBP18.73■□□□□ 0.59
PTCD3-210ENST00000473829 UGT1A1P22309 533 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 UGT1A4P22310 534 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 UGT1A3P35503 534 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 UGT1A5P35504 534 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 KCNJ1P48048 391 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 MAZP56270 477 aaKnown RBP18.73■□□□□ 0.59
PTCD3-210ENST00000473829 TARDBPQ13148 414 aaKnown RBP eCLIP18.73■□□□□ 0.59
PTCD3-210ENST00000473829 HLTFQ14527 1009 aaKnown RBP eCLIP18.73■□□□□ 0.59
PTCD3-210ENST00000473829 C14orf28Q4W4Y0 310 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 CHST15Q7LFX5 561 aaPredicted RBP18.73■□□□□ 0.59
PTCD3-210ENST00000473829 RASGEF1CQ8N431 466 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 DCBLD1Q8N8Z6 715 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 OR4K2Q8NGD2 314 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 OR13C4Q8NGS5 318 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 BRSK1Q8TDC3 778 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 ZDHHC1Q8WTX9 485 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 CCDC3Q9BQI4 270 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 UGT1A7Q9HAW7 530 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 UGT1A10Q9HAW8 530 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 UGT1A8Q9HAW9 530 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 FKBPLQ9UIM3 349 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 ZKSCAN5Q9Y2L8 839 aa18.73■□□□□ 0.59
PTCD3-210ENST00000473829 C2orf81A6NN90 581 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 CCL22O00626 93 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 CHUKO15111 745 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 LDB2O43679 373 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 EML2O95834 649 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 MT-CO3P00414 261 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 ACP5P13686 325 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 RPL22P35268 128 aaKnown RBP18.72■□□□□ 0.59
PTCD3-210ENST00000473829 GSE1Q14687 1217 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 CERCAMQ5T4B2 595 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 ZDHHC20Q5W0Z9 365 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 CRTC3Q6UUV7 619 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 C17orf82Q86X59 251 aaPredicted RBP18.72■□□□□ 0.59
PTCD3-210ENST00000473829 NAGSQ8N159 534 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 CCDC89Q8N998 374 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 DTX3LQ8TDB6 740 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 COG1Q8WTW3 980 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 MAIP1Q8WWC4 291 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 RMI1Q9H9A7 625 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 FEZ2Q9UHY8 353 aaPredicted RBP18.72■□□□□ 0.59
PTCD3-210ENST00000473829 CLCA2Q9UQC9 943 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 KCNK6Q9Y257 313 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 DRG1Q9Y295 367 aaKnown RBP18.72■□□□□ 0.59
PTCD3-210ENST00000473829 RNF215Q9Y6U7 377 aa18.72■□□□□ 0.59
PTCD3-210ENST00000473829 GRID2O43424 1007 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 PPFIA2O75334 1257 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 PRAMEF1O95521 474 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 ECEL1O95672 775 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 CRTAMO95727 393 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 FDFT1P37268 417 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 GRIA1P42261 906 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 TMPRSS15P98073 1019 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 XIAPP98170 497 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 SEMA5AQ13591 1074 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 LRP8Q14114 963 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 PLA2G4EQ3MJ16 856 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 ZNF547Q8IVP9 402 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 OR52K1Q8NGK4 314 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 LRRC45Q96CN5 670 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 ABCG4Q9H172 646 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 RAB6BQ9NRW1 208 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 SMOXQ9NWM0 555 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 SLC23A2Q9UGH3 650 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 PCDHB1Q9Y5F3 818 aa18.71■□□□□ 0.59
PTCD3-210ENST00000473829 KNTC1P50748 2209 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms