RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SUZ12Q15022 739 aaKnown RBP13.01□□□□□ -0.33
TPM3-216ENST00000473036 CHRNA6Q15825 494 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 PROX2Q3B8N5 592 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 ATP13A5Q4VNC0 1218 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 PRRT3Q5FWE3 981 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 CERCAMQ5T4B2 595 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 CCDC137Q6PK04 289 aaKnown RBP13.01□□□□□ -0.33
TPM3-216ENST00000473036 DOK6Q6PKX4 331 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 C19orf48Q6RUI8 117 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 ZNF534Q76KX8 674 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 NRROSQ86YC3 692 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 TRAM1L1Q8N609 369 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 CCDC89Q8N998 374 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 OR4K2Q8NGD2 314 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 OR13C4Q8NGS5 318 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 ATL2Q8NHH9 583 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 BRSK1Q8TDC3 778 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 LMX1AQ8TE12 382 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 HIC2Q96JB3 615 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 SPATA16Q9BXB7 569 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 DDX47Q9H0S4 455 aaKnown RBP13.01□□□□□ -0.33
TPM3-216ENST00000473036 TMEM168Q9H0V1 697 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 LRRC40Q9H9A6 602 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 CYP4F12Q9HCS2 524 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 CASS4Q9NQ75 786 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 PHPT1Q9NRX4 125 aaPredicted RBP13.01□□□□□ -0.33
TPM3-216ENST00000473036 PAK5Q9P286 719 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 SUFUQ9UMX1 484 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 PTPRBP23467 1997 aa13□□□□□ -0.33
TPM3-216ENST00000473036 COL27A1Q8IZC6 1860 aaPredicted RBP13□□□□□ -0.33
TPM3-216ENST00000473036 TNFRSF10CO14798 259 aa13□□□□□ -0.33
TPM3-216ENST00000473036 UGT1A9O60656 530 aa13□□□□□ -0.33
TPM3-216ENST00000473036 DNAJC6O75061 913 aa13□□□□□ -0.33
TPM3-216ENST00000473036 PRSS56P0CW18 603 aa13□□□□□ -0.33
TPM3-216ENST00000473036 UGT1A6P19224 532 aa13□□□□□ -0.33
TPM3-216ENST00000473036 UGT1A1P22309 533 aa13□□□□□ -0.33
TPM3-216ENST00000473036 UGT1A4P22310 534 aa13□□□□□ -0.33
TPM3-216ENST00000473036 HTR1BP28222 390 aa13□□□□□ -0.33
TPM3-216ENST00000473036 UGT1A3P35503 534 aa13□□□□□ -0.33
TPM3-216ENST00000473036 UGT1A5P35504 534 aa13□□□□□ -0.33
TPM3-216ENST00000473036 PTGIRP43119 386 aa13□□□□□ -0.33
TPM3-216ENST00000473036 VPS41P49754 854 aa13□□□□□ -0.33
TPM3-216ENST00000473036 TERF1P54274 439 aa13□□□□□ -0.33
TPM3-216ENST00000473036 PEX6Q13608 980 aa13□□□□□ -0.33
TPM3-216ENST00000473036 POU6F1Q14863 301 aa13□□□□□ -0.33
TPM3-216ENST00000473036 TAF1AQ15573 450 aaPredicted RBP13□□□□□ -0.33
TPM3-216ENST00000473036 DEFB133Q30KQ1 61 aa13□□□□□ -0.33
TPM3-216ENST00000473036 CCDC38Q502W7 563 aa13□□□□□ -0.33
TPM3-216ENST00000473036 ANKRD22Q5VYY1 191 aa13□□□□□ -0.33
TPM3-216ENST00000473036 FAM151BQ6UXP7 276 aa13□□□□□ -0.33
TPM3-216ENST00000473036 PNPLA1Q8N8W4 532 aa13□□□□□ -0.33
TPM3-216ENST00000473036 OR4C6Q8NH72 309 aa13□□□□□ -0.33
TPM3-216ENST00000473036 PLEKHG4BQ96PX9 1271 aa13□□□□□ -0.33
TPM3-216ENST00000473036 SRPK1Q96SB4 655 aaKnown RBP13□□□□□ -0.33
TPM3-216ENST00000473036 UGT1A7Q9HAW7 530 aa13□□□□□ -0.33
TPM3-216ENST00000473036 UGT1A10Q9HAW8 530 aa13□□□□□ -0.33
TPM3-216ENST00000473036 UGT1A8Q9HAW9 530 aa13□□□□□ -0.33
TPM3-216ENST00000473036 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13□□□□□ -0.33
TPM3-216ENST00000473036 HACD3Q9P035 362 aa13□□□□□ -0.33
TPM3-216ENST00000473036 FKBPLQ9UIM3 349 aa13□□□□□ -0.33
TPM3-216ENST00000473036 PRKAB1Q9Y478 270 aa13□□□□□ -0.33
TPM3-216ENST00000473036 MRFAP1Q9Y605 127 aa13□□□□□ -0.33
TPM3-216ENST00000473036 MROH6A6NGR9 719 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 LMO7DNF2Z398 122 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 MTX2O75431 263 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 RASGRP1O95267 797 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 TNFP01375 233 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 KRT14P02533 472 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 APRTP07741 180 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 LPOP22079 712 aaPredicted RBP12.99□□□□□ -0.33
TPM3-216ENST00000473036 PSMA3P25788 255 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 GNPDA1P46926 289 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 ARSDP51689 593 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 TMPRSS15P98073 1019 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 KCNJ11Q14654 390 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 MARK2Q7KZI7 788 aaKnown RBP12.99□□□□□ -0.33
TPM3-216ENST00000473036 GSTA5Q7RTV2 222 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 ADGRG6Q86SQ4 1221 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 LSM14AQ8ND56 463 aaKnown RBP12.99□□□□□ -0.33
TPM3-216ENST00000473036 GRK7Q8WTQ7 553 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 NAT14Q8WUY8 206 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 BTN2A2Q8WVV5 523 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 GLYATL1Q969I3 302 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 COL26A1Q96A83 441 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 DNAJC1Q96KC8 554 aaKnown RBP12.99□□□□□ -0.33
TPM3-216ENST00000473036 CNDP2Q96KP4 475 aaKnown RBP12.99□□□□□ -0.33
TPM3-216ENST00000473036 APOLD1Q96LR9 279 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 TBATAQ96M53 351 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 ZNF778Q96MU6 729 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 PPP1R2P1Q96PQ5 205 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 ZSCAN5AQ9BUG6 496 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 SLC13A1Q9BZW2 595 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 SUDS3Q9H7L9 328 aaPredicted RBP12.99□□□□□ -0.33
TPM3-216ENST00000473036 CARS2Q9HA77 564 aaKnown RBP12.99□□□□□ -0.33
TPM3-216ENST00000473036 NLGN3Q9NZ94 848 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 ATXN10Q9UBB4 475 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 SPASTQ9UBP0 616 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 CSNK1G3Q9Y6M4 447 aa12.99□□□□□ -0.33
TPM3-216ENST00000473036 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.98□□□□□ -0.33
TPM3-216ENST00000473036 CCDC78A2IDD5 438 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms