RNA–Protein interactions for RNA: ENST00000472977.6

CTSS-203, Transcript of cathepsin S, humanhuman

TSL 5

Gene CTSS, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-203ENST00000472977 MSI2Q96DH6 328 aaKnown RBP4.12□□□□□ -1.75
CTSS-203ENST00000472977 EDC3Q96F86 508 aaKnown RBP4.12□□□□□ -1.75
CTSS-203ENST00000472977 BICD1Q96G01 975 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 WDYHV1Q96HA8 205 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 PGAM5Q96HS1 289 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 GDAP1L1Q96MZ0 367 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 SPATA13Q96N96 652 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 MAP7D2Q96T17 732 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 EIF3CQ99613 913 aaKnown RBP4.12□□□□□ -1.75
CTSS-203ENST00000472977 PLK3Q9H4B4 646 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 IL1RAPL2Q9NP60 686 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 KCNK9Q9NPC2 374 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 MBNL1Q9NR56 388 aaKnown RBP4.12□□□□□ -1.75
CTSS-203ENST00000472977 SIRT3Q9NTG7 399 aaPredicted RBP4.12□□□□□ -1.75
CTSS-203ENST00000472977 P4HTMQ9NXG6 502 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 IL1RAPL1Q9NZN1 696 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 MGAT4CQ9UBM8 478 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 WNT16Q9UBV4 365 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 OSGIN1Q9UJX0 560 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 HPCAL4Q9UM19 191 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 LIPGQ9Y5X9 500 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 NFS1Q9Y697 457 aa4.12□□□□□ -1.75
CTSS-203ENST00000472977 SPAG9O60271 1321 aaKnown RBP4.12□□□□□ -1.75
CTSS-203ENST00000472977 SYCE3A1L190 88 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 TMEM110-MUSTN1A8MSY1 372 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 CDRT15L2A8MXV6 281 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 EIF3CLB5ME19 914 aaKnown RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 CA12O43570 354 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 PLRG1O43660 514 aaKnown RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 STX6O43752 255 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 CEP104O60308 925 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 KLHL41O60662 606 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 RTN2O75298 545 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 BCL10O95999 233 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 ZFYP08048 801 aaPredicted RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 GHRP10912 638 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 PDHBP11177 359 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 TNNT1P13805 278 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 PDGFRAP16234 1089 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 IL7RP16871 459 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 ERCC2P18074 760 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 HSPA4P34932 840 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 CASP3P42574 277 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 TNNT2P45379 298 aaPredicted RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 CRKLP46109 303 aaKnown RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 MTNR1AP48039 350 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 PCP4P48539 62 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 CLCN3P51790 818 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 TIAL1Q01085 375 aaKnown RBP eCLIP4.11□□□□□ -1.75
CTSS-203ENST00000472977 SCN1BQ07699 218 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 RALGDSQ12967 914 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 CSTF3Q12996 717 aaKnown RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 SEMA3BQ13214 749 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 ZNF273Q14593 569 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 IL13RA2Q14627 380 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 SLC18A3Q16572 532 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 KRTAP24-1Q3LI83 254 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 KCNT1Q5JUK3 1230 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 JADE1Q6IE81 842 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 C17orf99Q6UX52 265 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 SLC39A5Q6ZMH5 540 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 RGS9BPQ6ZS82 235 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 MOB3CQ70IA8 216 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 ERN2Q76MJ5 926 aaKnown RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 RRM2BQ7LG56 351 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 DHX40Q8IX18 779 aaKnown RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 VPS52Q8N1B4 723 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 HJURPQ8NCD3 748 aaPredicted RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 LMO3Q8TAP4 145 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 SHC3Q92529 594 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 FAM149B1Q96BN6 582 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 PABPC5Q96DU9 382 aaKnown RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 ZNF668Q96K58 619 aaPredicted RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 CFAP53Q96M91 514 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 TCEANC2Q96MN5 208 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 CRACR2AQ9BSW2 395 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 SF3B5Q9BWJ5 86 aaKnown RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 IFIH1Q9BYX4 1025 aaKnown RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 GPR88Q9GZN0 384 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 PAPOLBQ9NRJ5 636 aaKnown RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 ABCB8Q9NUT2 735 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 ARHGEF38Q9NXL2 777 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 HAO2Q9NYQ3 351 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 OGFRQ9NZT2 677 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 CRNNQ9UBG3 495 aaPredicted RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 ARMCX3Q9UH62 379 aaPredicted RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 APPL1Q9UKG1 709 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 PLAGL1Q9UM63 463 aa4.11□□□□□ -1.75
CTSS-203ENST00000472977 RPH3AQ9Y2J0 694 aaPredicted RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 COPG1Q9Y678 874 aaKnown RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 SIRT4Q9Y6E7 314 aaPredicted RBP4.11□□□□□ -1.75
CTSS-203ENST00000472977 A0A0G2JK05 382 aa4.1□□□□□ -1.75
CTSS-203ENST00000472977 A6NL46 340 aa4.1□□□□□ -1.75
CTSS-203ENST00000472977 F8W810 466 aa4.1□□□□□ -1.75
CTSS-203ENST00000472977 RRHO14718 337 aa4.1□□□□□ -1.75
CTSS-203ENST00000472977 SLC25A17O43808 307 aa4.1□□□□□ -1.75
CTSS-203ENST00000472977 LDB3O75112 727 aa4.1□□□□□ -1.75
CTSS-203ENST00000472977 NME6O75414 186 aaPredicted RBP4.1□□□□□ -1.75
CTSS-203ENST00000472977 CELF2O95319 508 aaKnown RBP4.1□□□□□ -1.75
CTSS-203ENST00000472977 MMP2P08253 660 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms