RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 PLD2O14939 933 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 TLX3O43711 291 aaPredicted RBP19.25■□□□□ 0.67
COMMD1-208ENST00000472729 NRDCO43847 1150 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 CPNE6O95741 557 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 PYGMP11217 842 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 BPIP17213 487 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 HMGCLP35914 325 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 MLLT3P42568 568 aaPredicted RBP19.25■□□□□ 0.67
COMMD1-208ENST00000472729 OR1D5P58170 312 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 SLC1A5Q15758 541 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 SFTPA2Q8IWL1 248 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 LRRC57Q8N9N7 239 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 KCNE4Q8WWG9 221 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 SH3KBP1Q96B97 665 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 LIN37Q96GY3 246 aaPredicted RBP19.25■□□□□ 0.67
COMMD1-208ENST00000472729 SLC46A1Q96NT5 459 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 PLEKHG4BQ96PX9 1271 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 WDR24Q96S15 920 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 GBA3Q9H227 469 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 OSGEPL1Q9H4B0 414 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 KCNK4Q9NYG8 393 aa19.25■□□□□ 0.67
COMMD1-208ENST00000472729 ATXN7L1Q9ULK2 861 aaPredicted RBP19.25■□□□□ 0.67
COMMD1-208ENST00000472729 CNOT6Q9ULM6 557 aaKnown RBP19.25■□□□□ 0.67
COMMD1-208ENST00000472729 OAS3Q9Y6K5 1087 aaKnown RBP19.25■□□□□ 0.67
COMMD1-208ENST00000472729 PTPRBP23467 1997 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 KMT2BQ9UMN6 2715 aaPredicted RBP19.24■□□□□ 0.67
COMMD1-208ENST00000472729 C2orf81A6NN90 581 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 KRT86O43790 486 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 NUAK1O60285 661 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 DNAJC6O75061 913 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 PPFIA2O75334 1257 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 CDK14O94921 469 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 FTCDO95954 541 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 VCLP18206 1134 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 CCKBRP32239 447 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 CLPPQ16740 277 aaPredicted RBP19.24■□□□□ 0.67
COMMD1-208ENST00000472729 INSCQ1MX18 579 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 KDELC1Q6UW63 502 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 USP53Q70EK8 1073 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 SLC9B2Q86UD5 537 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 JAMLQ86YT9 394 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 NAGSQ8N159 534 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 RNF10Q8N5U6 811 aaKnown RBP19.24■□□□□ 0.67
COMMD1-208ENST00000472729 AVL9Q8NBF6 648 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 EID2BQ96D98 161 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 MRGPRX2Q96LB1 330 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 HERPUD2Q9BSE4 406 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 ZCCHC2Q9C0B9 1178 aaKnown RBP19.24■□□□□ 0.67
COMMD1-208ENST00000472729 C10orf88Q9H8K7 445 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 ARFGAP3Q9NP61 516 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 ATXN10Q9UBB4 475 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 KCNK6Q9Y257 313 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 SPO11Q9Y5K1 396 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 FREM2Q5SZK8 3169 aa19.24■□□□□ 0.67
COMMD1-208ENST00000472729 PLXNB3Q9ULL4 1909 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 STX7O15400 261 aaKnown RBP19.23■□□□□ 0.67
COMMD1-208ENST00000472729 VEGFDO43915 354 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 ITGA2BP08514 1039 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 ZNF8P17098 575 aaPredicted RBP19.23■□□□□ 0.67
COMMD1-208ENST00000472729 SPAM1P38567 509 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 B4GALNT1Q00973 533 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 ANKRD20A2Q5SQ80 823 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 ANKRD20A1Q5TYW2 823 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 ANKRD20A3Q5VUR7 823 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 IGF2-ASQ6U949 168 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 ARHGEF18Q6ZSZ5 1173 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 B3GNT8Q7Z7M8 397 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 PDZD3Q86UT5 571 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 OR10G6Q8NH81 332 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 BRSK1Q8TDC3 778 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 PATE1Q8WXA2 126 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 ALG3Q92685 438 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 OXNAD1Q96HP4 312 aaPredicted RBP19.23■□□□□ 0.67
COMMD1-208ENST00000472729 DPYSL5Q9BPU6 564 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 FAM118BQ9BPY3 351 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 FICDQ9BVA6 458 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 RDH14Q9HBH5 336 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 NFKBIL1Q9UBC1 381 aaPredicted RBP19.23■□□□□ 0.67
COMMD1-208ENST00000472729 TRIM10Q9UDY6 481 aa19.23■□□□□ 0.67
COMMD1-208ENST00000472729 RALYQ9UKM9 306 aaKnown RBP19.23■□□□□ 0.67
COMMD1-208ENST00000472729 OR5K4A6NMS3 321 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 AGRPO00253 132 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 AURKAO14965 403 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 KMOO15229 486 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 CASC3O15234 703 aaKnown RBP19.22■□□□□ 0.67
COMMD1-208ENST00000472729 ITPKBP27987 946 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 CHRNA4P43681 627 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 UCNP55089 124 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 GPLD1P80108 840 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 HHEXQ03014 270 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 TMEM164Q5U3C3 297 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 CRTC3Q6UUV7 619 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 LRRTM4Q86VH4 590 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 C17orf82Q86X59 251 aaPredicted RBP19.22■□□□□ 0.67
COMMD1-208ENST00000472729 TMEM139Q8IV31 216 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 TRIM48Q8IWZ4 208 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 UBE2Q2Q8WVN8 375 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 SPATA13Q96N96 652 aa19.22■□□□□ 0.67
COMMD1-208ENST00000472729 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.22■□□□□ 0.67
COMMD1-208ENST00000472729 DPH1Q9BZG8 443 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms