RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 C17orf82Q86X59 251 aaPredicted RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 REXO1L1PQ8IX06 675 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 NAGSQ8N159 534 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 ARL14Q8N4G2 192 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 TAB3Q8N5C8 712 aaPredicted RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 MDM1Q8TC05 714 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 DTX3LQ8TDB6 740 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 ZCCHC14Q8WYQ9 949 aaKnown RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 ANP32BQ92688 251 aaKnown RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 RTP4Q96DX8 246 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 DEPDC7Q96QD5 511 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 VPS35Q96QK1 796 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 NRSN2Q9GZP1 204 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 OR2AG1Q9H205 316 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 CCDC86Q9H6F5 360 aaKnown RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 UGT1A7Q9HAW7 530 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 UGT1A10Q9HAW8 530 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 UGT1A8Q9HAW9 530 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 FEZ2Q9UHY8 353 aaPredicted RBP9.06□□□□□ -0.96
SYN3-211ENST00000472027 APPL1Q9UKG1 709 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 ZMIZ1Q9ULJ6 1067 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 ARL5AQ9Y689 179 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 RNF215Q9Y6U7 377 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 SPEGQ15772 3267 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 PTPRBP23467 1997 aa9.06□□□□□ -0.96
SYN3-211ENST00000472027 LRP4O75096 1905 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 ARID1BQ8NFD5 2236 aaPredicted RBP9.05□□□□□ -0.96
SYN3-211ENST00000472027 CNOT1A5YKK6 2376 aaKnown RBP9.05□□□□□ -0.96
SYN3-211ENST00000472027 TRBV23OR9-2A0A075B6M9 112 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 GLYATL1P3A0A0U1RQE8 302 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 A0A1W2PQM1 296 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 GPR89AB7ZAQ6 455 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 TAF4O00268 1085 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 NTN3O00634 580 aaPredicted RBP9.05□□□□□ -0.96
SYN3-211ENST00000472027 CHUKO15111 745 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 NUDT21O43809 227 aaKnown RBP9.05□□□□□ -0.96
SYN3-211ENST00000472027 VEGFDO43915 354 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 CEP104O60308 925 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 CSO75390 466 aaKnown RBP9.05□□□□□ -0.96
SYN3-211ENST00000472027 MTX2O75431 263 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 TCEA3O75764 348 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 CDK14O94921 469 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 CRTAMO95727 393 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 AP2A1O95782 977 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 IFNB1P01574 187 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 FGGP02679 453 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 GPR89BP0CG08 455 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 ACP5P13686 325 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 ETS1P14921 441 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 TPH1P17752 444 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 CA5AP35218 305 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 ITGA9Q13797 1035 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 RTP5Q14D33 572 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 LONRF2Q1L5Z9 754 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 ISXQ2M1V0 245 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 KHDC1Q4VXA5 237 aaKnown RBP9.05□□□□□ -0.96
SYN3-211ENST00000472027 CERCAMQ5T4B2 595 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 FAM151BQ6UXP7 276 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 PRUNE1Q86TP1 453 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 PHYKPLQ8IUZ5 450 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 Q8N9G6 341 aaPredicted RBP9.05□□□□□ -0.96
SYN3-211ENST00000472027 OR4K2Q8NGD2 314 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 WDR48Q8TAF3 677 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 GDAP1Q8TB36 358 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 ZNF398Q8TD17 642 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 MAIP1Q8WWC4 291 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 PATE1Q8WXA2 126 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 KCNF1Q9H3M0 494 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 LRRN3Q9H3W5 708 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 LRRC40Q9H9A6 602 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 ETNK1Q9HBU6 452 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 KCNK6Q9Y257 313 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 DRG1Q9Y295 367 aaKnown RBP9.05□□□□□ -0.96
SYN3-211ENST00000472027 JRKLQ9Y4A0 524 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 KCTD3Q9Y597 815 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 PCDHB1Q9Y5F3 818 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 AK5Q9Y6K8 562 aa9.05□□□□□ -0.96
SYN3-211ENST00000472027 RHPN2P1A8MT19 583 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 GAPDHSO14556 408 aaPredicted RBP9.04□□□□□ -0.96
SYN3-211ENST00000472027 KMOO15229 486 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 PPM1DO15297 605 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 GPR39O43194 453 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 ZSCAN12O43309 604 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 B4GAT1O43505 415 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 LDB2O43679 373 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 SNX2O60749 519 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 EML2O95834 649 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 RPLP0P05388 317 aaKnown RBP9.04□□□□□ -0.96
SYN3-211ENST00000472027 ZSCAN5DPP0CG00 497 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 ACTN2P35609 894 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 TMPRSS15P98073 1019 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 XIAPP98170 497 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 B4GALNT1Q00973 533 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 PDE1BQ01064 536 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 BIRC2Q13490 618 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 SPIDRQ14159 915 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 DRICH1Q6PGQ1 229 aaPredicted RBP9.04□□□□□ -0.96
SYN3-211ENST00000472027 CRTC3Q6UUV7 619 aa9.04□□□□□ -0.96
SYN3-211ENST00000472027 RBM44Q6ZP01 1051 aaKnown RBP9.04□□□□□ -0.96
SYN3-211ENST00000472027 LRRTM4Q86VH4 590 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms